RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 OTOP1Q7RTM1 612 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 E2F7Q96AV8 911 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 OR14A2Q96R54 314 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 SEMA4AQ9H3S1 761 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 MAGEL2Q9UJ55 1249 aa6.68□□□□□ -1.34
VPS50-206ENST00000443443 H7C1D1 291 aa6.67□□□□□ -1.34
VPS50-206ENST00000443443 AMHP03971 560 aa6.67□□□□□ -1.34
VPS50-206ENST00000443443 SDSP20132 328 aa6.67□□□□□ -1.34
VPS50-206ENST00000443443 COMTP21964 271 aa6.67□□□□□ -1.34
VPS50-206ENST00000443443 MECP2P51608 486 aaKnown RBP6.67□□□□□ -1.34
VPS50-206ENST00000443443 C21orf62-AS1Q17RA5 79 aa6.67□□□□□ -1.34
VPS50-206ENST00000443443 TMEM200BQ69YZ2 307 aa6.67□□□□□ -1.34
VPS50-206ENST00000443443 TRIM68Q6AZZ1 485 aa6.67□□□□□ -1.34
VPS50-206ENST00000443443 FUKQ8N0W3 1084 aa6.67□□□□□ -1.34
VPS50-206ENST00000443443 OR14K1Q8NGZ2 314 aa6.67□□□□□ -1.34
VPS50-206ENST00000443443 OR10A2Q9H208 303 aa6.67□□□□□ -1.34
VPS50-206ENST00000443443 ACSS2Q9NR19 701 aa6.67□□□□□ -1.34
VPS50-206ENST00000443443 TRAF5O00463 557 aa6.66□□□□□ -1.34
VPS50-206ENST00000443443 FSHBP01225 129 aa6.66□□□□□ -1.34
VPS50-206ENST00000443443 SLC6A3Q01959 620 aa6.66□□□□□ -1.34
VPS50-206ENST00000443443 ALDH6A1Q02252 535 aaKnown RBP6.66□□□□□ -1.34
VPS50-206ENST00000443443 PABPC4Q13310 644 aaKnown RBP eCLIP6.66□□□□□ -1.34
VPS50-206ENST00000443443 PRKD1Q15139 912 aaPredicted RBP6.66□□□□□ -1.34
VPS50-206ENST00000443443 SPDYAQ5MJ70 313 aa6.66□□□□□ -1.34
VPS50-206ENST00000443443 CDCA2Q69YH5 1023 aaPredicted RBP6.66□□□□□ -1.34
VPS50-206ENST00000443443 FOXRED1Q96CU9 486 aaPredicted RBP6.66□□□□□ -1.34
VPS50-206ENST00000443443 PIF1Q9H611 641 aa6.66□□□□□ -1.34
VPS50-206ENST00000443443 DVL2O14641 736 aa6.65□□□□□ -1.34
VPS50-206ENST00000443443 CYP17A1P05093 508 aa6.65□□□□□ -1.34
VPS50-206ENST00000443443 RGS3P49796 1198 aa6.65□□□□□ -1.34
VPS50-206ENST00000443443 ROM1Q03395 351 aa6.65□□□□□ -1.34
VPS50-206ENST00000443443 ADAM15Q13444 863 aa6.65□□□□□ -1.34
VPS50-206ENST00000443443 NFYCQ13952 458 aa6.65□□□□□ -1.34
VPS50-206ENST00000443443 RTN4RL1Q86UN2 441 aaPredicted RBP6.65□□□□□ -1.34
VPS50-206ENST00000443443 KIAA1958Q8N8K9 716 aa6.65□□□□□ -1.34
VPS50-206ENST00000443443 TUBGCP5Q96RT8 1024 aa6.65□□□□□ -1.34
VPS50-206ENST00000443443 FOXB1Q99853 325 aa6.65□□□□□ -1.34
VPS50-206ENST00000443443 PLA2G12BQ9BX93 195 aa6.65□□□□□ -1.34
VPS50-206ENST00000443443 IFT57Q9NWB7 429 aa6.65□□□□□ -1.34
VPS50-206ENST00000443443 TMEM260Q9NX78 707 aa6.65□□□□□ -1.34
VPS50-206ENST00000443443 SAE1Q9UBE0 346 aaPredicted RBP6.65□□□□□ -1.34
VPS50-206ENST00000443443 MATN2O00339 956 aa6.64□□□□□ -1.35
VPS50-206ENST00000443443 RAD17O75943 681 aa6.64□□□□□ -1.35
VPS50-206ENST00000443443 SLC9A1P19634 815 aa6.64□□□□□ -1.35
VPS50-206ENST00000443443 ACO1P21399 889 aaKnown RBP6.64□□□□□ -1.35
VPS50-206ENST00000443443 RPS19P39019 145 aaKnown RBP6.64□□□□□ -1.35
VPS50-206ENST00000443443 FNTBP49356 437 aa6.64□□□□□ -1.35
VPS50-206ENST00000443443 NEK4P51957 841 aa6.64□□□□□ -1.35
VPS50-206ENST00000443443 TCEA2Q15560 299 aa6.64□□□□□ -1.35
VPS50-206ENST00000443443 PRAMEF9Q5VWM5 478 aa6.64□□□□□ -1.35
VPS50-206ENST00000443443 MAGEC2Q9UBF1 373 aaPredicted RBP6.64□□□□□ -1.35
VPS50-206ENST00000443443 B4GALT6Q9UBX8 382 aa6.64□□□□□ -1.35
VPS50-206ENST00000443443 ZKSCAN5Q9Y2L8 839 aa6.64□□□□□ -1.35
VPS50-206ENST00000443443 TESMINQ9Y4I5 508 aa6.64□□□□□ -1.35
VPS50-206ENST00000443443 UBA6A0AVT1 1052 aaPredicted RBP6.63□□□□□ -1.35
VPS50-206ENST00000443443 PTX3P26022 381 aaPredicted RBP6.63□□□□□ -1.35
VPS50-206ENST00000443443 R3HDM1Q15032 1099 aaKnown RBP6.63□□□□□ -1.35
VPS50-206ENST00000443443 TTC38Q5R3I4 469 aa6.63□□□□□ -1.35
VPS50-206ENST00000443443 SLFN12LQ6IEE8 588 aa6.63□□□□□ -1.35
VPS50-206ENST00000443443 POLNQ7Z5Q5 900 aa6.63□□□□□ -1.35
VPS50-206ENST00000443443 HOMER1Q86YM7 354 aa6.63□□□□□ -1.35
VPS50-206ENST00000443443 SYNPOQ8N3V7 929 aa6.63□□□□□ -1.35
VPS50-206ENST00000443443 TMEM176AQ96HP8 235 aa6.63□□□□□ -1.35
VPS50-206ENST00000443443 MAML3Q96JK9 1138 aa6.63□□□□□ -1.35
VPS50-206ENST00000443443 RNPC3Q96LT9 517 aaKnown RBP6.63□□□□□ -1.35
VPS50-206ENST00000443443 POLR3GLQ9BT43 218 aa6.63□□□□□ -1.35
VPS50-206ENST00000443443 VPS11Q9H270 941 aa6.63□□□□□ -1.35
VPS50-206ENST00000443443 CD2APQ9Y5K6 639 aa6.63□□□□□ -1.35
VPS50-206ENST00000443443 GOLGA8BA8MQT2 603 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 CBX4O00257 560 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 H2AFYO75367 372 aaKnown RBP6.62□□□□□ -1.35
VPS50-206ENST00000443443 RFPL3O75679 317 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 APOL3O95236 402 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 C6P13671 934 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 NRN1LQ496H8 165 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 CNNM4Q6P4Q7 775 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 NME9Q86XW9 330 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 CFHR4Q92496 578 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 FAM89AQ96GI7 184 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 ZNF341Q9BYN7 854 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 PLA2G3Q9NZ20 509 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 DENND2AQ9ULE3 1009 aa6.62□□□□□ -1.35
VPS50-206ENST00000443443 KPNA6O60684 536 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 PRLP01236 227 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 MSX2P35548 267 aaPredicted RBP6.61□□□□□ -1.35
VPS50-206ENST00000443443 SESN2P58004 480 aaPredicted RBP6.61□□□□□ -1.35
VPS50-206ENST00000443443 ANTXR2P58335 489 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 ATP2C1P98194 919 aaPredicted RBP6.61□□□□□ -1.35
VPS50-206ENST00000443443 HHEXQ03014 270 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 GRM7Q14831 915 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 ACAP1Q15027 740 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 DGKDQ16760 1214 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 USP39Q53GS9 565 aaKnown RBP6.61□□□□□ -1.35
VPS50-206ENST00000443443 KLHDC10Q6PID8 442 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 SGMS1Q86VZ5 419 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 FAM177A1Q8N128 213 aaPredicted RBP6.61□□□□□ -1.35
VPS50-206ENST00000443443 SHCBP1Q8NEM2 672 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 APPBP2Q92624 585 aa6.61□□□□□ -1.35
VPS50-206ENST00000443443 GCDHQ92947 438 aaPredicted RBP6.61□□□□□ -1.35
VPS50-206ENST00000443443 ELF4Q99607 663 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms