RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 E9PMD0 336 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 SGK1O00141 431 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 XPO1O14980 1071 aaKnown RBP11.03□□□□□ -0.64
LIN54-202ENST00000442461 ATP6V1C1P21283 382 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 SNX16P57768 344 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 SLC34A1Q06495 639 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 IDI1Q13907 227 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 ACCSLQ4AC99 568 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 ERICH1Q86X53 443 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 REXO1Q8N1G1 1221 aaKnown RBP11.03□□□□□ -0.64
LIN54-202ENST00000442461 USP38Q8NB14 1042 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 ZCRB1Q8TBF4 217 aaKnown RBP11.03□□□□□ -0.64
LIN54-202ENST00000442461 MRPL40Q9NQ50 206 aaKnown RBP11.03□□□□□ -0.64
LIN54-202ENST00000442461 MAD1L1Q9Y6D9 718 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 ZNF532Q9HCE3 1301 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 FLT4P35916 1363 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 MED23Q9ULK4 1368 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 SSU72P8A0A1W2PR75 194 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 PEX5P50542 639 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 XRCC4Q13426 336 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 EZH2Q15910 746 aaKnown RBP11.03□□□□□ -0.64
LIN54-202ENST00000442461 TSGA10IPQ3SY00 556 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 BBS9Q3SYG4 887 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 MIS18BP1Q6P0N0 1132 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 GALNT15Q8N3T1 639 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 TAB3Q8N5C8 712 aaPredicted RBP11.03□□□□□ -0.64
LIN54-202ENST00000442461 MYCT1Q8N699 235 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 CNBD1Q8NA66 436 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 POLR3CQ9BUI4 534 aaPredicted RBP11.03□□□□□ -0.64
LIN54-202ENST00000442461 TRABDQ9H4I3 376 aa11.03□□□□□ -0.64
LIN54-202ENST00000442461 MAPK4P31152 587 aa11.02□□□□□ -0.64
LIN54-202ENST00000442461 SLC39A6Q13433 755 aa11.02□□□□□ -0.64
LIN54-202ENST00000442461 RIPK1Q13546 671 aa11.02□□□□□ -0.64
LIN54-202ENST00000442461 SLC29A2Q14542 456 aa11.02□□□□□ -0.64
LIN54-202ENST00000442461 SLF2Q8IX21 1173 aa11.02□□□□□ -0.64
LIN54-202ENST00000442461 RDH13Q8NBN7 331 aa11.02□□□□□ -0.64
LIN54-202ENST00000442461 LARP4BQ92615 738 aaKnown RBP11.02□□□□□ -0.64
LIN54-202ENST00000442461 TATDN2Q93075 761 aa11.02□□□□□ -0.64
LIN54-202ENST00000442461 ABHD8Q96I13 439 aa11.02□□□□□ -0.64
LIN54-202ENST00000442461 PABPC3Q9H361 631 aaKnown RBP11.02□□□□□ -0.64
LIN54-202ENST00000442461 STX18Q9P2W9 335 aaKnown RBP11.02□□□□□ -0.64
LIN54-202ENST00000442461 SSX2IPQ9Y2D8 614 aa11.02□□□□□ -0.64
LIN54-202ENST00000442461 SH3BP1Q9Y3L3 701 aa11.02□□□□□ -0.64
LIN54-202ENST00000442461 LCA5LO95447 670 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 S100A1P23297 94 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 MTTPP55157 894 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 LONRF1Q17RB8 773 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 CCDC137Q6PK04 289 aaKnown RBP11.02□□□□□ -0.65
LIN54-202ENST00000442461 PRCCQ92733 491 aaPredicted RBP11.02□□□□□ -0.65
LIN54-202ENST00000442461 SNX25Q9H3E2 840 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 GPHNQ9NQX3 736 aaPredicted RBP11.02□□□□□ -0.65
LIN54-202ENST00000442461 STRIP2Q9ULQ0 834 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 ORC6Q9Y5N6 252 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 STK24Q9Y6E0 443 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 NPATQ14207 1427 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 SH3TC1Q8TE82 1336 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 ERVK-24P63145 666 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 USP4Q13107 963 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 ZNF211Q13398 564 aaPredicted RBP11.02□□□□□ -0.65
LIN54-202ENST00000442461 POLA2Q14181 598 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 ARL6IP4Q66PJ3 421 aaKnown RBP11.02□□□□□ -0.65
LIN54-202ENST00000442461 ZNF554Q86TJ5 538 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 USP33Q8TEY7 942 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 SCG3Q8WXD2 468 aaKnown RBP11.02□□□□□ -0.65
LIN54-202ENST00000442461 KCNK16Q96T55 309 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 TRIM51Q9BSJ1 452 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 MTO1Q9Y2Z2 717 aaKnown RBP11.02□□□□□ -0.65
LIN54-202ENST00000442461 AP4S1Q9Y587 144 aa11.02□□□□□ -0.65
LIN54-202ENST00000442461 MAST3O60307 1309 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 TNKSO95271 1327 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 SOS2Q07890 1332 aaPredicted RBP11.01□□□□□ -0.65
LIN54-202ENST00000442461 PYGLP06737 847 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 PTPN4P29074 926 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 GARSP41250 739 aaKnown RBP11.01□□□□□ -0.65
LIN54-202ENST00000442461 CBX3Q13185 183 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 NCAPHQ15003 741 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 LRRC41Q15345 812 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 GALNT17Q6IS24 598 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 TRIM67Q6ZTA4 783 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 RFWD2Q8NHY2 731 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 TEX13AQ9BXU3 409 aaPredicted RBP11.01□□□□□ -0.65
LIN54-202ENST00000442461 DISC1Q9NRI5 854 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 AGPAT5Q9NUQ2 364 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 DTNAQ9Y4J8 743 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 SYCE1LA8MT33 242 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 P4HA2O15460 535 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 OCM2P0CE71 109 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 OCMP0CE72 109 aaPredicted RBP11.01□□□□□ -0.65
LIN54-202ENST00000442461 RINT1Q6NUQ1 792 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 B3GNT6Q6ZMB0 384 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 CADPS2Q86UW7 1296 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 CCDC125Q86Z20 511 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 IFNL2Q8IZJ0 200 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 GABPB2Q8TAK5 448 aaPredicted RBP11.01□□□□□ -0.65
LIN54-202ENST00000442461 EME1Q96AY2 570 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 BTBD6Q96KE9 485 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 LZTS2Q9BRK4 669 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 COPRSQ9NQ92 184 aa11.01□□□□□ -0.65
LIN54-202ENST00000442461 HNRNPRO43390 633 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms