RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 LIMCH1Q9UPQ0 1083 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 PCDHGB3Q9Y5G1 929 aa4.99□□□□□ -1.61
CDC42BPA-207ENST00000441725 KRIT1O00522 736 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 SLC27A2O14975 620 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 MTHFD2P13995 350 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 BDNFP23560 247 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 EDNRBP24530 442 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 SDHAP31040 664 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 PRIM2P49643 509 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 RENBPP51606 427 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 SLC5A3P53794 718 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 MUM1Q2TAK8 710 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 MROH9Q5TGP6 573 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 ESPNLQ6ZVH7 1005 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 THAP5Q7Z6K1 395 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 PHYKPLQ8IUZ5 450 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 NKAPQ8N5F7 415 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 TSPEARQ8WU66 669 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 AUTS2Q8WXX7 1259 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 MTA3Q9BTC8 594 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 RC3H2Q9HBD1 1191 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 RIC8BQ9NVN3 520 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 MAP3K20Q9NYL2 800 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 DPP7Q9UHL4 492 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 TMPRSS11EQ9UL52 423 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 PLAGL2Q9UPG8 496 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 RASA4BC9J798 803 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 GOLIM4O00461 696 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 RASA4O43374 803 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 ESR1P03372 595 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 C4BPAP04003 597 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 HTR1BP28222 390 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 CCT2P78371 535 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 DUSP4Q13115 394 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 IFIT5Q13325 482 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 TRIM25Q14258 630 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 RNF220Q5VTB9 566 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 WDR78Q5VTH9 848 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 ZNF354CQ86Y25 554 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 MYLK4Q86YV6 388 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 RIOX2Q8IUF8 465 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 OR2C3Q8N628 320 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 DEPTORQ8TB45 409 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 ERCC4Q92889 916 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 MFSD14AQ96MC6 490 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 NACC1Q96RE7 527 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 JMJD8Q96S16 334 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 KCTD10Q9H3F6 313 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 GTF2A1LQ9UNN4 478 aa4.98□□□□□ -1.61
CDC42BPA-207ENST00000441725 PRAMEF25A6NGN4 478 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 FOXP2O15409 715 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 DTNBO60941 627 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 APOL3O95236 402 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 CEACAM5P06731 702 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 PIK3CBP42338 1070 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 AGFG1P52594 562 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 EPHA5P54756 1037 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 LGALS4P56470 323 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 CDK17Q00537 523 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 CNN3Q15417 329 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 ANO6Q4KMQ2 910 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 ALFQ53S48 1182 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 STEAP3Q658P3 488 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 UNQ6494/PRO21346Q6UXR6 183 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 ARHGAP27Q6ZUM4 889 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 SYDE1Q6ZW31 735 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 LYSMD2Q8IV50 215 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 RIPOR3Q96MK2 946 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 CGRRF1Q99675 332 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 MYL10Q9BUA6 226 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 C7orf69Q9H7B7 122 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 AS3MTQ9HBK9 375 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 ATP13A1Q9HD20 1204 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 PDLIM7Q9NR12 457 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 FBXO9Q9UK97 447 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 DGKBQ9Y6T7 804 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 CCDC154A6NI56 674 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 HTRA2O43464 458 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 SLC26A4O43511 780 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 MMEP08473 750 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 SRGNP10124 158 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 GJA4P35212 333 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 CLCN7P51798 805 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 CACNB3P54284 484 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 BTBD8Q5XKL5 378 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 CCDC70Q6NSX1 233 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 KRBA2Q6ZNG9 492 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 RTN4RL1Q86UN2 441 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 NME9Q86XW9 330 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 SLC41A1Q8IVJ1 513 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 KRT78Q8N1N4 520 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 ASB15Q8WXK1 588 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 FOXRED1Q96CU9 486 aaPredicted RBP4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 RAX2Q96IS3 184 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 WDR12Q9GZL7 423 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 IFT122Q9HBG6 1241 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 DMRT3Q9NQL9 472 aa4.97□□□□□ -1.61
CDC42BPA-207ENST00000441725 C9orf78Q9NZ63 289 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms