RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 SETD4Q9NVD3 440 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 SPATA6Q9NWH7 488 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-210ENST00000441703 IGSF9Q9P2J2 1179 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 PYCARDQ9ULZ3 195 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 LZTS1Q9Y250 596 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 HCFC2Q9Y5Z7 792 aa7.33□□□□□ -1.24
HDAC6-210ENST00000441703 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.33□□□□□ -1.24
HDAC6-210ENST00000441703 POTEMA6NI47 508 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 TBKBP1A7MCY6 615 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 HIDE1A8MVS5 230 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 NOP56O00567 594 aaKnown RBP7.32□□□□□ -1.24
HDAC6-210ENST00000441703 GPAA1O43292 621 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 EPB41L2O43491 1005 aaKnown RBP7.32□□□□□ -1.24
HDAC6-210ENST00000441703 GGPS1O95749 300 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 CHRNA1P02708 482 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 SLC3A2P08195 630 aaKnown RBP7.32□□□□□ -1.24
HDAC6-210ENST00000441703 SCG2P13521 617 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 LAG3P18627 525 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 HOXC8P31273 242 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 NOVP48745 357 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 GATMP50440 423 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 KRT17Q04695 432 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 SPEM2Q0P670 501 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 SMC1AQ14683 1233 aaKnown RBP7.32□□□□□ -1.24
HDAC6-210ENST00000441703 HSDL1Q3SXM5 330 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 USH1GQ495M9 461 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 CELF3Q5SZQ8 465 aaKnown RBP7.32□□□□□ -1.24
HDAC6-210ENST00000441703 N4BP2L1Q5TBK1 243 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-210ENST00000441703 PHLDB3Q6NSJ2 640 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 KCNV1Q6PIU1 500 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 POTEGQ6S5H5 508 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 C12orf76Q8N812 135 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-210ENST00000441703 COLGALT1Q8NBJ5 622 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 RMDN3Q96TC7 470 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 C16orf70Q9BSU1 422 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 BCO2Q9BYV7 579 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 MAF1Q9H063 256 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 EPC1Q9H2F5 836 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 KCNF1Q9H3M0 494 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 DCTPP1Q9H773 170 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 EHMT1Q9H9B1 1298 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 MLXIPQ9HAP2 919 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 PARD6AQ9NPB6 346 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 ZSCAN32Q9NX65 697 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 FBXO4Q9UKT5 387 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 ZNF215Q9UL58 517 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-210ENST00000441703 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.32□□□□□ -1.24
HDAC6-210ENST00000441703 PCDHB7Q9Y5E2 793 aa7.32□□□□□ -1.24
HDAC6-210ENST00000441703 FRMPD2Q68DX3 1309 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-210ENST00000441703 TSPY2A6NKD2 308 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 C1QTNF9BB2RNN3 333 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 RAB11FIP3O75154 756 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 EIF3JO75822 258 aaKnown RBP7.31□□□□□ -1.24
HDAC6-210ENST00000441703 APPP05067 770 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 LGALS2P05162 132 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 C1QTNF9P0C862 333 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 GSPT1P15170 499 aaKnown RBP7.31□□□□□ -1.24
HDAC6-210ENST00000441703 EIF2AK2P19525 551 aaKnown RBP7.31□□□□□ -1.24
HDAC6-210ENST00000441703 CD52P31358 61 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 ANAPC15P60006 121 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 UBE2HP62256 183 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 PPARAQ07869 468 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 FBXO47Q5MNV8 452 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 MYSM1Q5VVJ2 828 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 TTBK2Q6IQ55 1244 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 TAF2Q6P1X5 1199 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-210ENST00000441703 C17orf53Q8N3J3 647 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-210ENST00000441703 RGS22Q8NE09 1264 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 CCDC112Q8NEF3 446 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 PJA1Q8NG27 643 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 LINC01599Q8WXQ3 324 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 OSBP2Q969R2 916 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 TMX3Q96JJ7 454 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 TAAR1Q96RJ0 339 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 NACAP1Q9BZK3 213 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 GPCPD1Q9NPB8 672 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 ARHGEF3Q9NR81 526 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 GEMIN8Q9NWZ8 242 aaKnown RBP7.31□□□□□ -1.24
HDAC6-210ENST00000441703 DLGAP2Q9P1A6 1054 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 FEZ2Q9UHY8 353 aaPredicted RBP7.31□□□□□ -1.24
HDAC6-210ENST00000441703 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.31□□□□□ -1.24
HDAC6-210ENST00000441703 CDY2AQ9Y6F7 541 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 MAST4O15021 2626 aa7.31□□□□□ -1.24
HDAC6-210ENST00000441703 TMEM8BA6NDV4 472 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 M0QZ92 97 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 NEMFO60524 1076 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 CLASP2O75122 1294 aaKnown RBP7.3□□□□□ -1.24
HDAC6-210ENST00000441703 HMMRO75330 724 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 ZFYP08048 801 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-210ENST00000441703 SRFP11831 508 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 MYCLP12524 364 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-210ENST00000441703 TGM1P22735 817 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 GBP2P32456 591 aaPredicted RBP7.3□□□□□ -1.24
HDAC6-210ENST00000441703 PPM1AP35813 382 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 PLCB3Q01970 1234 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 RING1Q06587 406 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 MGAT3Q09327 533 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 PAK2Q13177 524 aa7.3□□□□□ -1.24
HDAC6-210ENST00000441703 DCLRE1AQ6PJP8 1040 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms