RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PIGWQ7Z7B1 504 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 MFN1Q8IWA4 741 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 C18orf8Q96DM3 657 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 TGS1Q96RS0 853 aaKnown RBP8.14□□□□□ -1.11
HDAC9-214ENST00000441542 PYM1Q9BRP8 204 aaKnown RBP8.14□□□□□ -1.11
HDAC9-214ENST00000441542 ADAM7Q9H2U9 754 aa8.14□□□□□ -1.11
HDAC9-214ENST00000441542 TRMT112Q9UI30 125 aaKnown RBP8.14□□□□□ -1.11
HDAC9-214ENST00000441542 RTL9Q8NET4 1388 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 POTEMA6NI47 508 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 ASAP2O43150 1006 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 CREB3O43889 395 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 SH3BP5O60239 455 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 KCNA3P22001 575 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 ALDH3A1P30838 453 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 CD151P48509 253 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 RIPK1Q13546 671 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 SV2BQ7L1I2 683 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 ADGRA1Q86SQ6 560 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 CADPS2Q86UW7 1296 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 SRRM1Q8IYB3 904 aaKnown RBP8.13□□□□□ -1.11
HDAC9-214ENST00000441542 IFNL2Q8IZJ0 200 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 ABTB1Q969K4 478 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-214ENST00000441542 CALML4Q96GE6 196 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 PWWP2AQ96N64 755 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 POP1Q99575 1024 aaKnown RBP8.13□□□□□ -1.11
HDAC9-214ENST00000441542 TCRBV5S4A2TA0A5A2 114 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 WDR91A4D1P6 747 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 WTIPA6NIX2 430 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-214ENST00000441542 SMAPO00193 183 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 PJA2O43164 708 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 KRT18P05783 430 aaKnown RBP8.13□□□□□ -1.11
HDAC9-214ENST00000441542 PAEPP09466 180 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 PTDSS1P48651 473 aaKnown RBP8.13□□□□□ -1.11
HDAC9-214ENST00000441542 USP11P51784 963 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 KCNQ4P56696 695 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 CDK17Q00537 523 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 IRF5Q13568 498 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 CNGA2Q16280 664 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 EXOC3L4Q17RC7 722 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 EMC10Q5UCC4 262 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 ZNF571Q7Z3V5 609 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-214ENST00000441542 TNFRSF25Q93038 417 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 TLCD1Q96CP7 247 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 FGFBP2Q9BYJ0 223 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 FAM114A2Q9NRY5 505 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 STX8Q9UNK0 236 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 ABCC12Q96J65 1359 aa8.13□□□□□ -1.11
HDAC9-214ENST00000441542 UNCXA6NJT0 531 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 GFPT2O94808 682 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 GM2AP17900 193 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 PEX5P50542 639 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 FUT2Q10981 343 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 DNAJC3Q13217 504 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 SLMAPQ14BN4 828 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 ASTE1Q2TB18 679 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-214ENST00000441542 PRUNE1Q86TP1 453 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 SCFD2Q8WU76 684 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.12□□□□□ -1.11
HDAC9-214ENST00000441542 CYTH2Q99418 400 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 MAF1Q9H063 256 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 MYLK2Q9H1R3 596 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 KBTBD4Q9NVX7 518 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.12□□□□□ -1.11
HDAC9-214ENST00000441542 SCOCQ9UIL1 159 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 CNTNAP5Q8WYK1 1306 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 MAGEB6P1A0A0J9YX57 407 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 A0A1W2PRG0 241 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 CYP27B1O15528 508 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 ATP9AO75110 1047 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 BRAFP15056 766 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 TROAPQ12815 778 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 SEC23AQ15436 765 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 DRAXINQ8NBI3 349 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-214ENST00000441542 KCNH5Q8NCM2 988 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 PIGOQ8TEQ8 1089 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 UTP4Q969X6 686 aaKnown RBP8.12□□□□□ -1.11
HDAC9-214ENST00000441542 PBKQ96KB5 322 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 VCXQ9H320 206 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 CUEDC2Q9H467 287 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 AMFRQ9UKV5 643 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 ARL2BPQ9Y2Y0 163 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 IRS4O14654 1257 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-214ENST00000441542 RGL2O15211 777 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 NOL4O94818 638 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 PDE8BO95263 885 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 H2AFZP0C0S5 128 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 TPP2P29144 1249 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-214ENST00000441542 MMP13P45452 471 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 APLP1P51693 650 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 BNIP1Q12981 228 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 RFWD3Q6PCD5 774 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 H2AFVQ71UI9 128 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 EXOC3L1Q86VI1 746 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 CCDC105Q8IYK2 499 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 GALNT15Q8N3T1 639 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 FAM13CQ8NE31 585 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 LRRC8CQ8TDW0 803 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 MAIP1Q8WWC4 291 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 KIFAP3Q92845 792 aa8.12□□□□□ -1.11
HDAC9-214ENST00000441542 RBM41Q96IZ5 413 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms