RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 SKIV2LQ15477 1246 aaKnown RBP20.46■□□□□ 0.87
SMPD4-210ENST00000441135 CALCRLQ16602 461 aa20.46■□□□□ 0.87
SMPD4-210ENST00000441135 KIAA0319LQ8IZA0 1049 aa20.46■□□□□ 0.87
SMPD4-210ENST00000441135 GJA10Q969M2 543 aa20.46■□□□□ 0.87
SMPD4-210ENST00000441135 ASB2Q96Q27 587 aa20.46■□□□□ 0.87
SMPD4-210ENST00000441135 C17orf80Q9BSJ5 609 aa20.46■□□□□ 0.87
SMPD4-210ENST00000441135 PADI3Q9ULW8 664 aa20.46■□□□□ 0.87
SMPD4-210ENST00000441135 MAGEB2O15479 319 aa20.45■□□□□ 0.86
SMPD4-210ENST00000441135 CHMP2AO43633 222 aa20.45■□□□□ 0.86
SMPD4-210ENST00000441135 MARCH6O60337 910 aa20.45■□□□□ 0.86
SMPD4-210ENST00000441135 DKC1O60832 514 aaKnown RBP eCLIP20.45■□□□□ 0.86
SMPD4-210ENST00000441135 OATP04181 439 aa20.45■□□□□ 0.86
SMPD4-210ENST00000441135 PDCP20941 246 aa20.45■□□□□ 0.86
SMPD4-210ENST00000441135 SPIRE1Q08AE8 756 aa20.45■□□□□ 0.86
SMPD4-210ENST00000441135 AAK1Q2M2I8 961 aa20.45■□□□□ 0.86
SMPD4-210ENST00000441135 ODR4Q5SWX8 454 aa20.45■□□□□ 0.86
SMPD4-210ENST00000441135 MTMR9Q96QG7 549 aa20.45■□□□□ 0.86
SMPD4-210ENST00000441135 PRRC2BQ5JSZ5 2229 aaKnown RBP20.45■□□□□ 0.86
SMPD4-210ENST00000441135 H3BQV1 296 aa20.44■□□□□ 0.86
SMPD4-210ENST00000441135 WNT7AO00755 349 aa20.44■□□□□ 0.86
SMPD4-210ENST00000441135 ZNF862O60290 1169 aa20.44■□□□□ 0.86
SMPD4-210ENST00000441135 PRKCEQ02156 737 aa20.44■□□□□ 0.86
SMPD4-210ENST00000441135 EPC2Q52LR7 807 aa20.44■□□□□ 0.86
SMPD4-210ENST00000441135 ZNF710Q8N1W2 664 aa20.44■□□□□ 0.86
SMPD4-210ENST00000441135 LINC01599Q8WXQ3 324 aa20.44■□□□□ 0.86
SMPD4-210ENST00000441135 NRBP2Q9NSY0 501 aa20.44■□□□□ 0.86
SMPD4-210ENST00000441135 GINS2Q9Y248 185 aa20.44■□□□□ 0.86
SMPD4-210ENST00000441135 ADGRA3Q8IWK6 1321 aa20.44■□□□□ 0.86
SMPD4-210ENST00000441135 TTC28Q96AY4 2481 aa20.43■□□□□ 0.86
SMPD4-210ENST00000441135 PSMC5P62195 406 aa20.43■□□□□ 0.86
SMPD4-210ENST00000441135 EPHA7Q15375 998 aa20.43■□□□□ 0.86
SMPD4-210ENST00000441135 TTC38Q5R3I4 469 aa20.43■□□□□ 0.86
SMPD4-210ENST00000441135 LARP1BQ659C4 914 aaKnown RBP20.43■□□□□ 0.86
SMPD4-210ENST00000441135 TRMT1LQ7Z2T5 733 aaKnown RBP20.43■□□□□ 0.86
SMPD4-210ENST00000441135 NPAS4Q8IUM7 802 aa20.43■□□□□ 0.86
SMPD4-210ENST00000441135 FIBCD1Q8N539 461 aa20.43■□□□□ 0.86
SMPD4-210ENST00000441135 METTL13Q8N6R0 699 aa20.43■□□□□ 0.86
SMPD4-210ENST00000441135 MAP7D2Q96T17 732 aa20.43■□□□□ 0.86
SMPD4-210ENST00000441135 RC3H2Q9HBD1 1191 aaKnown RBP20.43■□□□□ 0.86
SMPD4-210ENST00000441135 PCDHA12Q9UN75 941 aa20.43■□□□□ 0.86
SMPD4-210ENST00000441135 COG5Q9UP83 839 aa20.43■□□□□ 0.86
SMPD4-210ENST00000441135 RWDD3Q9Y3V2 267 aa20.43■□□□□ 0.86
SMPD4-210ENST00000441135 EML1O00423 815 aa20.42■□□□□ 0.86
SMPD4-210ENST00000441135 P4HBP07237 508 aaKnown RBP20.42■□□□□ 0.86
SMPD4-210ENST00000441135 TMOD1P28289 359 aa20.42■□□□□ 0.86
SMPD4-210ENST00000441135 CRYBB1P53674 252 aaPredicted RBP20.42■□□□□ 0.86
SMPD4-210ENST00000441135 UGCGQ16739 394 aa20.42■□□□□ 0.86
SMPD4-210ENST00000441135 PTPROQ16827 1216 aa20.42■□□□□ 0.86
SMPD4-210ENST00000441135 RILPL1Q5EBL4 403 aa20.42■□□□□ 0.86
SMPD4-210ENST00000441135 XKR3Q5GH77 459 aa20.42■□□□□ 0.86
SMPD4-210ENST00000441135 TMEM192Q8IY95 271 aa20.42■□□□□ 0.86
SMPD4-210ENST00000441135 NEK9Q8TD19 979 aa20.42■□□□□ 0.86
SMPD4-210ENST00000441135 PPME1Q9Y570 386 aa20.42■□□□□ 0.86
SMPD4-210ENST00000441135 GPR182O15218 404 aa20.41■□□□□ 0.86
SMPD4-210ENST00000441135 RPS6KA5O75582 802 aa20.41■□□□□ 0.86
SMPD4-210ENST00000441135 STAG3L1P0CL83 205 aa20.41■□□□□ 0.86
SMPD4-210ENST00000441135 MCM7P33993 719 aa20.41■□□□□ 0.86
SMPD4-210ENST00000441135 QARSP47897 775 aaKnown RBP20.41■□□□□ 0.86
SMPD4-210ENST00000441135 MRPL38Q96DV4 380 aaKnown RBP20.41■□□□□ 0.86
SMPD4-210ENST00000441135 NIFKQ9BYG3 293 aaKnown RBP20.41■□□□□ 0.86
SMPD4-210ENST00000441135 TMEM60Q9H2L4 133 aa20.41■□□□□ 0.86
SMPD4-210ENST00000441135 TTC12Q9H892 705 aaPredicted RBP20.41■□□□□ 0.86
SMPD4-210ENST00000441135 ERVK-5Q9HDB9 667 aa20.41■□□□□ 0.86
SMPD4-210ENST00000441135 RNF216Q9NWF9 866 aaPredicted RBP20.41■□□□□ 0.86
SMPD4-210ENST00000441135 H3BNC9 293 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 LAD1O00515 517 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 DGKIO75912 1065 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 OR52Z1P0C646 297 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 CLCN3P51790 818 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 NFX1Q12986 1120 aaKnown RBP20.4■□□□□ 0.86
SMPD4-210ENST00000441135 BTG3Q14201 252 aaPredicted RBP20.4■□□□□ 0.86
SMPD4-210ENST00000441135 TARBP2Q15633 366 aaKnown RBP20.4■□□□□ 0.86
SMPD4-210ENST00000441135 KIZQ2M2Z5 673 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 TMEM266Q2M3C6 531 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 MCTP1Q6DN14 999 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 RTN4RL1Q86UN2 441 aaPredicted RBP20.4■□□□□ 0.86
SMPD4-210ENST00000441135 HSCBQ8IWL3 235 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 C4orf19Q8IY42 314 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 CRIPAKQ8N1N5 446 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 TMEM40Q8WWA1 233 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 HLA-CQ95604 372 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 ZNF689Q96CS4 500 aaPredicted RBP20.4■□□□□ 0.86
SMPD4-210ENST00000441135 TMX1Q9H3N1 280 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 NOC2LQ9Y3T9 749 aaKnown RBP20.4■□□□□ 0.86
SMPD4-210ENST00000441135 VCANP13611 3396 aa20.4■□□□□ 0.86
SMPD4-210ENST00000441135 C5orf67F2Z3F1 127 aa20.39■□□□□ 0.85
SMPD4-210ENST00000441135 GPR32O75388 356 aa20.39■□□□□ 0.85
SMPD4-210ENST00000441135 STBD1O95210 358 aa20.39■□□□□ 0.85
SMPD4-210ENST00000441135 LYPLA2O95372 231 aa20.39■□□□□ 0.85
SMPD4-210ENST00000441135 VTNP04004 478 aa20.39■□□□□ 0.85
SMPD4-210ENST00000441135 RB1P06400 928 aa20.39■□□□□ 0.85
SMPD4-210ENST00000441135 CTNNB1P35222 781 aa20.39■□□□□ 0.85
SMPD4-210ENST00000441135 TOB1P50616 345 aaPredicted RBP20.39■□□□□ 0.85
SMPD4-210ENST00000441135 TBC1D8BQ0IIM8 1120 aa20.39■□□□□ 0.85
SMPD4-210ENST00000441135 GPM6BQ13491 265 aa20.39■□□□□ 0.85
SMPD4-210ENST00000441135 TIGD5Q53EQ6 642 aa20.39■□□□□ 0.85
SMPD4-210ENST00000441135 EFCAB12Q6NXP0 572 aa20.39■□□□□ 0.85
SMPD4-210ENST00000441135 BRAPQ7Z569 592 aa20.39■□□□□ 0.85
SMPD4-210ENST00000441135 CMTR2Q8IYT2 770 aaKnown RBP20.39■□□□□ 0.85
SMPD4-210ENST00000441135 LINC01465Q8N7H1 131 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms