RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 TECP42680 631 aa17.84■□□□□ 0.45
TRAPPC12-209ENST00000441099 CRYBB1P53674 252 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC12-209ENST00000441099 DRP2Q13474 957 aa17.84■□□□□ 0.45
TRAPPC12-209ENST00000441099 NEK9Q8TD19 979 aa17.84■□□□□ 0.45
TRAPPC12-209ENST00000441099 MAP7D2Q96T17 732 aa17.84■□□□□ 0.45
TRAPPC12-209ENST00000441099 PPP1R16BQ96T49 567 aa17.84■□□□□ 0.45
TRAPPC12-209ENST00000441099 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.84■□□□□ 0.45
TRAPPC12-209ENST00000441099 AKT3Q9Y243 479 aa17.84■□□□□ 0.45
TRAPPC12-209ENST00000441099 GINS2Q9Y248 185 aa17.84■□□□□ 0.45
TRAPPC12-209ENST00000441099 NOC2LQ9Y3T9 749 aaKnown RBP17.84■□□□□ 0.45
TRAPPC12-209ENST00000441099 PPME1Q9Y570 386 aa17.84■□□□□ 0.45
TRAPPC12-209ENST00000441099 TANC1Q9C0D5 1861 aa17.84■□□□□ 0.45
TRAPPC12-209ENST00000441099 TLL1O43897 1013 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 ARHGEF15O94989 841 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 CA3P07451 260 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 SPATA31C1P0DKV0 1188 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 NLRP11P59045 1033 aaKnown RBP17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 PTGDRQ13258 359 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 GRIN2CQ14957 1233 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 TMEM266Q2M3C6 531 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 RILPL1Q5EBL4 403 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 OTUD6AQ7L8S5 288 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 MYOCDQ8IZQ8 938 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 TOP1MTQ969P6 601 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 CEP170P1Q96L14 293 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 CDX2Q99626 313 aaPredicted RBP17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 RAD9AQ99638 391 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 OSMRQ99650 979 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 SLC28A3Q9HAS3 691 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 ERVK-5Q9HDB9 667 aa17.83■□□□□ 0.44
TRAPPC12-209ENST00000441099 FXR2P51116 673 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRAPPC12-209ENST00000441099 GPC3P51654 580 aa17.82■□□□□ 0.44
TRAPPC12-209ENST00000441099 PAK2Q13177 524 aa17.82■□□□□ 0.44
TRAPPC12-209ENST00000441099 RTN4RL1Q86UN2 441 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC12-209ENST00000441099 ZNF710Q8N1W2 664 aa17.82■□□□□ 0.44
TRAPPC12-209ENST00000441099 LINC01599Q8WXQ3 324 aa17.82■□□□□ 0.44
TRAPPC12-209ENST00000441099 JPH2Q9BR39 696 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC12-209ENST00000441099 ZBED2Q9BTP6 218 aa17.82■□□□□ 0.44
TRAPPC12-209ENST00000441099 TMX1Q9H3N1 280 aa17.82■□□□□ 0.44
TRAPPC12-209ENST00000441099 DHX33Q9H6R0 707 aaKnown RBP17.82■□□□□ 0.44
TRAPPC12-209ENST00000441099 CHD9Q3L8U1 2897 aa17.82■□□□□ 0.44
TRAPPC12-209ENST00000441099 SCN5AQ14524 2016 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 LCHNA4D1U4 455 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 RPS6KA5O75582 802 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 PDCP20941 246 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 XKR9Q5GH70 373 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 PPP2R2DQ66LE6 453 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 FAM117BQ6P1L5 589 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 FAM228AQ86W67 206 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 CATSPER3Q86XQ3 398 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 ZNF668Q96K58 619 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 POLR3CQ9BUI4 534 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 FTHL17Q9BXU8 183 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 TUFT1Q9NNX1 390 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 ANKEF1Q9NU02 776 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 SUCLA2Q9P2R7 463 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 ST3GAL5Q9UNP4 418 aa17.81■□□□□ 0.44
TRAPPC12-209ENST00000441099 TET1Q8NFU7 2136 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 LAD1O00515 517 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 MED24O75448 989 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 SYT1P21579 422 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 RFC5P40937 340 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 DNM2P50570 870 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 HTRA4P83105 476 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 CDC42EP1Q00587 391 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 PDIA5Q14554 519 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 IL17AQ16552 155 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 FAM43BQ6ZT52 329 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 IGSF22Q8N9C0 903 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 PIGOQ8TEQ8 1089 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 SLC7A3Q8WY07 619 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 TSPYL2Q9H2G4 693 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 STXBP5LQ9Y2K9 1186 aa17.8■□□□□ 0.44
TRAPPC12-209ENST00000441099 TRIP12Q14669 1992 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 A0A087WWV3 80 aa17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 VPS37CA5D8V6 355 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 GPR182O15218 404 aa17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 MGEA5O60502 916 aa17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 XRCC6P12956 609 aaKnown RBP eCLIP17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 DARSP14868 501 aaKnown RBP17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 EIF4BP23588 611 aaKnown RBP17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 RPA1P27694 616 aa17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 PRPHP41219 470 aa17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 POLGP54098 1239 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 TAP1Q03518 808 aa17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 NFX1Q12986 1120 aaKnown RBP17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 BRAPQ7Z569 592 aa17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 EXOC8Q8IYI6 725 aa17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 CRIPAKQ8N1N5 446 aa17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 ERMNQ8TAM6 284 aa17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 MYLIPQ8WY64 445 aa17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 INSL6Q9Y581 213 aa17.79■□□□□ 0.44
TRAPPC12-209ENST00000441099 UPP2O95045 317 aa17.78■□□□□ 0.44
TRAPPC12-209ENST00000441099 RARRES1P49788 294 aa17.78■□□□□ 0.44
TRAPPC12-209ENST00000441099 ATP2C1P98194 919 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC12-209ENST00000441099 EMC2Q15006 297 aa17.78■□□□□ 0.44
TRAPPC12-209ENST00000441099 ECM1Q16610 540 aa17.78■□□□□ 0.44
TRAPPC12-209ENST00000441099 ODR4Q5SWX8 454 aa17.78■□□□□ 0.44
TRAPPC12-209ENST00000441099 SPRED2Q7Z698 418 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms