RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 SKAP2O75563 359 aaPredicted RBP12.94□□□□□ -0.34
LTBR-203ENST00000441074 CLTAP09496 248 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 ALADP13716 330 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 FAM83BQ5T0W9 1011 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 GUF1Q8N442 669 aaKnown RBP12.94□□□□□ -0.34
LTBR-203ENST00000441074 MDM1Q8TC05 714 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 SEC14L1Q92503 715 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 TBC1D5Q92609 795 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 NLRC4Q9NPP4 1024 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 SPATS2LQ9NUQ6 558 aaKnown RBP12.94□□□□□ -0.34
LTBR-203ENST00000441074 NOP53Q9NZM5 478 aaKnown RBP12.94□□□□□ -0.34
LTBR-203ENST00000441074 MAD2L2Q9UI95 211 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 CEP104O60308 925 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 NOL4O94818 638 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 SLC35G1Q2M3R5 365 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 STRIP1Q5VSL9 837 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 CC2D2BQ6DHV5 1058 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 LRRC55Q6ZSA7 311 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 HEATR3Q7Z4Q2 680 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
LTBR-203ENST00000441074 SLF2Q8IX21 1173 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 HPS3Q969F9 1004 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 CEP95Q96GE4 821 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 TDRD3Q9H7E2 651 aaKnown RBP12.94□□□□□ -0.34
LTBR-203ENST00000441074 KCNMB3Q9NPA1 279 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 HOMER3Q9NSC5 361 aa12.94□□□□□ -0.34
LTBR-203ENST00000441074 BAZ2BQ9UIF8 2168 aaKnown RBP12.93□□□□□ -0.34
LTBR-203ENST00000441074 A0A087X0T9 212 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 PVALEFA0A1B0GWK0 134 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 DDTLA6NHG4 134 aaPredicted RBP12.93□□□□□ -0.34
LTBR-203ENST00000441074 PGRMC1O00264 195 aaKnown RBP12.93□□□□□ -0.34
LTBR-203ENST00000441074 DAPK3O43293 454 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 FAM228BP0C875 321 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 DHX9Q08211 1270 aaKnown RBP12.93□□□□□ -0.34
LTBR-203ENST00000441074 SOGA3Q5TF21 947 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 FOXR2Q6PJQ5 311 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 C16orf86Q6ZW13 317 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 RTKN2Q8IZC4 609 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 TMEM47Q9BQJ4 181 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■□□□ 11.4
LTBR-203ENST00000441074 ZMYND12Q9H0C1 365 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 SLITRK6Q9H5Y7 841 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 FAM114A2Q9NRY5 505 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 AKR1B1P15121 316 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 PLCG2P16885 1265 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 NONOQ15233 471 aaKnown RBP eCLIP12.93□□□□□ -0.34
LTBR-203ENST00000441074 IFI16Q16666 785 aaKnown RBP12.93□□□□□ -0.34
LTBR-203ENST00000441074 C10orf76Q5T2E6 689 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 UNC13DQ70J99 1090 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 TRPM8Q7Z2W7 1104 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 TBC1D1Q86TI0 1168 aaPredicted RBP12.93□□□□□ -0.34
LTBR-203ENST00000441074 HOOK3Q86VS8 718 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 LARGE2Q8N3Y3 721 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 CCDC26Q8TAB7 109 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 AGAP11Q8TF27 550 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 SAAL1Q96ER3 474 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 CALML4Q96GE6 196 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 PRMT6Q96LA8 375 aaPredicted RBP12.93□□□□□ -0.34
LTBR-203ENST00000441074 SH3GL3Q99963 347 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 SPZ1Q9BXG8 430 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 PACSIN1Q9BY11 444 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 STK17AQ9UEE5 414 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 L3MBTL1Q9Y468 752 aa12.93□□□□□ -0.34
LTBR-203ENST00000441074 ADAMTSL1Q8N6G6 1762 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 KLHL33A6NCF5 533 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 PALM3A6NDB9 673 aaPredicted RBP12.92□□□□□ -0.34
LTBR-203ENST00000441074 NFKBIEO00221 500 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 LIN7AO14910 233 aaPredicted RBP12.92□□□□□ -0.34
LTBR-203ENST00000441074 PPFIA2O75334 1257 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 SMNDC1O75940 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
LTBR-203ENST00000441074 GNA11P29992 359 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 INHBEP58166 350 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 BIRC2Q13490 618 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 CAPRIN2Q6IMN6 1127 aaKnown RBP12.92□□□□□ -0.34
LTBR-203ENST00000441074 USP17L2Q6R6M4 530 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 ATXN2LQ8WWM7 1075 aaKnown RBP12.92□□□□□ -0.34
LTBR-203ENST00000441074 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.92□□□□□ -0.34
LTBR-203ENST00000441074 AP1M1Q9BXS5 423 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 TXLNGYQ9BZA5 131 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 TANGO6Q9C0B7 1094 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 DDX47Q9H0S4 455 aaKnown RBP12.92□□□□□ -0.34
LTBR-203ENST00000441074 KIF9Q9HAQ2 790 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 PANK4Q9NVE7 773 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 AIPL1Q9NZN9 384 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 SAMD15Q9P1V8 674 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 MYH7BA7E2Y1 1941 aa12.92□□□□□ -0.34
LTBR-203ENST00000441074 CLRN2A0PK11 232 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 KRIT1O00522 736 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 MMEP08473 750 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 ZBTB48P10074 688 aaPredicted RBP12.91□□□□□ -0.34
LTBR-203ENST00000441074 NQO1P15559 274 aaKnown RBP12.91□□□□□ -0.34
LTBR-203ENST00000441074 CHN1P15882 459 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 CCND1P24385 295 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 MMP13P45452 471 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 MIS18BP1Q6P0N0 1132 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 SV2BQ7L1I2 683 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 SH3BP5LQ7L8J4 393 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 NEK8Q86SG6 692 aa12.91□□□□□ -0.34
LTBR-203ENST00000441074 ZNF570Q96NI8 536 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms