RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ZNF215Q9UL58 517 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-209ENST00000440653 ODF2LQ9ULJ1 636 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 DAAM1Q9Y4D1 1078 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 ATP8B3O60423 1300 aa10.07□□□□□ -0.8
HDAC6-209ENST00000440653 LTBP2Q14767 1821 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 PHF20L1A8MW92 1017 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 CETN3O15182 167 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 CALUO43852 315 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-209ENST00000440653 PSMD10O75832 226 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 RPL13P26373 211 aaKnown RBP10.06□□□□□ -0.8
HDAC6-209ENST00000440653 HOXA13P31271 388 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-209ENST00000440653 OAZ1P54368 228 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 ECM1Q16610 540 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 PTPN21Q16825 1174 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 HERC4Q5GLZ8 1057 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-209ENST00000440653 GPAT2Q6NUI2 795 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 XRRA1Q6P2D8 792 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 CATSPER3Q86XQ3 398 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 CREBRFQ8IUR6 639 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 FMNL3Q8IVF7 1028 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 ZNF710Q8N1W2 664 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 CPLX3Q8WVH0 158 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 C12orf42Q96LP6 360 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 PCMTD1Q96MG8 357 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-209ENST00000440653 WRNIP1Q96S55 665 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 EIF2AK1Q9BQI3 630 aaKnown RBP10.06□□□□□ -0.8
HDAC6-209ENST00000440653 DESI2Q9BSY9 194 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 WDR18Q9BV38 432 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 TIPINQ9BVW5 301 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 MRPL44Q9H9J2 332 aaKnown RBP10.06□□□□□ -0.8
HDAC6-209ENST00000440653 METTL14Q9HCE5 456 aaKnown RBP10.06□□□□□ -0.8
HDAC6-209ENST00000440653 LUC7LQ9NQ29 371 aaKnown RBP10.06□□□□□ -0.8
HDAC6-209ENST00000440653 TYW1Q9NV66 732 aaKnown RBP10.06□□□□□ -0.8
HDAC6-209ENST00000440653 PPP1R9AQ9ULJ8 1098 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 TRAF3IP3Q9Y228 551 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 SIK3Q9Y2K2 1263 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 CTDP1Q9Y5B0 961 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-209ENST00000440653 PCDHA2Q9Y5H9 948 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 MRFAP1Q9Y605 127 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 SMCHD1A6NHR9 2005 aa10.06□□□□□ -0.8
HDAC6-209ENST00000440653 ANO9A1A5B4 782 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 CTAGE9A4FU28 777 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 EIF3CLB5ME19 914 aaKnown RBP10.05□□□□□ -0.8
HDAC6-209ENST00000440653 PDXKO00764 312 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 KRT86O43790 486 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 GPR37L1O60883 481 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 TADA3O75528 432 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 URI1O94763 535 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-209ENST00000440653 SPATA31C1P0DKV0 1188 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 ANXA13P27216 316 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 STAT3P40763 770 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 EPHA7Q15375 998 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 KIAA1755Q5JYT7 1200 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 PCNX4Q63HM2 1172 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 EPM2AIP1Q7L775 607 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-209ENST00000440653 SCYL3Q8IZE3 742 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 CEP112Q8N8E3 955 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 RDM1Q8NG50 284 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 NEK11Q8NG66 645 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 GOLGA5Q8TBA6 731 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 SYN2Q92777 582 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-209ENST00000440653 NACC1Q96RE7 527 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 EIF3CQ99613 913 aaKnown RBP10.05□□□□□ -0.8
HDAC6-209ENST00000440653 REEP2Q9BRK0 252 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 ZNF577Q9BSK1 485 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 KCTD10Q9H3F6 313 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 SLC38A10Q9HBR0 1119 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 EMILIN3Q9NT22 766 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 CEP72Q9P209 647 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 EPN1Q9Y6I3 576 aaPredicted RBP10.05□□□□□ -0.8
HDAC6-209ENST00000440653 WDR81Q562E7 1941 aa10.05□□□□□ -0.8
HDAC6-209ENST00000440653 LRRC37A2A6NM11 1700 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 SSU72P8A0A1W2PR75 194 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 MEIS1O00470 390 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 COBLO75128 1261 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 ZBED4O75132 1171 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 FAM13AO94988 1023 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 HMGCRP04035 888 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 EPB41P11171 864 aaKnown RBP10.04□□□□□ -0.8
HDAC6-209ENST00000440653 VCAM1P19320 739 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 GUCY2CP25092 1073 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 SNAP25P60880 206 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 NHLH1Q02575 133 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 PABPC4Q13310 644 aaKnown RBP eCLIP10.04□□□□□ -0.8
HDAC6-209ENST00000440653 GIT2Q14161 759 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 MTF1Q14872 753 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 SPA17Q15506 151 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 ZYXQ15942 572 aaKnown RBP10.04□□□□□ -0.8
HDAC6-209ENST00000440653 WHAMMP3Q1A5X7 153 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 KNOP1Q1ED39 458 aaKnown RBP10.04□□□□□ -0.8
HDAC6-209ENST00000440653 NOL9Q5SY16 702 aaKnown RBP10.04□□□□□ -0.8
HDAC6-209ENST00000440653 B3GNT9Q6UX72 402 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 FRMD5Q7Z6J6 570 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 SFR1Q86XK3 245 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 TRIM59Q8IWR1 403 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 SCFD1Q8WVM8 642 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 UBXN4Q92575 508 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 GOLGA1Q92805 767 aa10.04□□□□□ -0.8
HDAC6-209ENST00000440653 PARK7Q99497 189 aaKnown RBP10.04□□□□□ -0.8
HDAC6-209ENST00000440653 NAPGQ99747 312 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms