RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 PCDHA12Q9UN75 941 aa16.18■□□□□ 0.18
TNFRSF1A-204ENST00000440083 NR2E3Q9Y5X4 410 aa16.18■□□□□ 0.18
TNFRSF1A-204ENST00000440083 STK24Q9Y6E0 443 aa16.18■□□□□ 0.18
TNFRSF1A-204ENST00000440083 TRIP12Q14669 1992 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1A-204ENST00000440083 MROH7Q68CQ1 1323 aa16.18■□□□□ 0.18
TNFRSF1A-204ENST00000440083 IGKV6D-21A0A0A0MT36 114 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 WDR64B1ANS9 1081 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 ERCC5P28715 1186 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 CUL4BQ13620 913 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 PLCB4Q15147 1175 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 SWSAP1Q6NVH7 229 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 MIER3Q7Z3K6 550 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 SESTD1Q86VW0 696 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 ZSCAN30Q86W11 494 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 SPC24Q8NBT2 197 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 ERMNQ8TAM6 284 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 ZBTB10Q96DT7 871 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 LRRC27Q9C0I9 530 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 SMARCAD1Q9H4L7 1026 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 AZI2Q9H6S1 392 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 ZNF302Q9NR11 478 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 SETD4Q9NVD3 440 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 GABBR1Q9UBS5 961 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 GTF2IRD1Q9UHL9 959 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 SAMM50Q9Y512 469 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 WDR81Q562E7 1941 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 UMODL1Q5DID0 1318 aa16.17■□□□□ 0.18
TNFRSF1A-204ENST00000440083 ESPNB1AK53 854 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 TLR3O15455 904 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 CBFA2T2O43439 604 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 PSAPP07602 524 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 ATP4AP20648 1035 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 BMP6P22004 513 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 STAT5BP51692 787 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 PTPN11Q06124 597 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 NCAPHQ15003 741 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 PTGISQ16647 500 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 NAALADL2Q58DX5 795 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 HAUS3Q68CZ6 603 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 NCAPH2Q6IBW4 605 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 SV2BQ7L1I2 683 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 TRMT1LQ7Z2T5 733 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 SMAP1Q8IYB5 467 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 WNT8BQ93098 351 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 MRFAP1L1Q96HT8 127 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 FAM20AQ96MK3 541 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 MMTAG2Q9BU76 263 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 GTPBP4Q9BZE4 634 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 PPP1R12CQ9BZL4 782 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 NT5C3AQ9H0P0 336 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 KBTBD4Q9NVX7 518 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 ERAP1Q9NZ08 941 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 PCDHA10Q9Y5I2 948 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 IGSF9BQ9UPX0 1349 aa16.16■□□□□ 0.18
TNFRSF1A-204ENST00000440083 KIAA0355O15063 1070 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 CYP2C18P33260 490 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 CCT6AP40227 531 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 JAK3P52333 1124 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 ASIC1P78348 528 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 SPIRE1Q08AE8 756 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 PPFIA1Q13136 1202 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 GRB10Q13322 594 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 PPP2R5CQ13362 524 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 STIM1Q13586 685 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 KCNB1Q14721 858 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 TMEM119Q4V9L6 283 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 ZNF658Q5TYW1 1059 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 FAM160B1Q5W0V3 765 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 KLHL10Q6JEL2 608 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 PLPPR4Q7Z2D5 763 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 ENOX1Q8TC92 643 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 LMBR1Q8WVP7 490 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 TRAPPC12Q8WVT3 735 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 DHX38Q92620 1227 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 NOC4LQ9BVI4 516 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 EXOC1Q9NV70 894 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 TRPC6Q9Y210 931 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 NOD1Q9Y239 953 aa16.15■□□□□ 0.18
TNFRSF1A-204ENST00000440083 LOXHD1Q8IVV2 1947 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 C17orf102A2RUQ5 167 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 TREHO43280 583 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 ZNF862O60290 1169 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 HOXC8P31273 242 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 MAGEA10P43363 369 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 IGBP1P78318 339 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 GRIK4Q16099 956 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 TPD52L1Q16890 204 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 BANK1Q8NDB2 785 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 AFAP1L1Q8TED9 768 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 LARP4BQ92615 738 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 RAD54LQ92698 747 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 BADQ92934 168 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 PNMA5Q96PV4 448 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 MTRQ99707 1265 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 C7orf25Q9BPX7 421 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 SEZ6LQ9BYH1 1024 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 PRKAG2Q9UGJ0 569 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 CTNND2Q9UQB3 1225 aa16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 MYH9P35579 1960 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-204ENST00000440083 POTEB3A0JP26 581 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms