RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 RPS6KA5O75582 802 aa26.93■■□□□ 1.9
CPNE1-217ENST00000439669 IGFBP4P22692 258 aa26.93■■□□□ 1.9
CPNE1-217ENST00000439669 CRYBB1P53674 252 aaPredicted RBP26.93■■□□□ 1.9
CPNE1-217ENST00000439669 CYP4A11Q02928 519 aa26.93■■□□□ 1.9
CPNE1-217ENST00000439669 ANO5Q75V66 913 aa26.93■■□□□ 1.9
CPNE1-217ENST00000439669 TMEM40Q8WWA1 233 aa26.93■■□□□ 1.9
CPNE1-217ENST00000439669 DYDC2Q96IM9 177 aa26.93■■□□□ 1.9
CPNE1-217ENST00000439669 SCLT1Q96NL6 688 aa26.93■■□□□ 1.9
CPNE1-217ENST00000439669 TMEM60Q9H2L4 133 aa26.93■■□□□ 1.9
CPNE1-217ENST00000439669 NOL7Q9UMY1 257 aaKnown RBP26.93■■□□□ 1.9
CPNE1-217ENST00000439669 NOC2LQ9Y3T9 749 aaKnown RBP26.93■■□□□ 1.9
CPNE1-217ENST00000439669 ENPP3O14638 875 aa26.92■■□□□ 1.9
CPNE1-217ENST00000439669 NLRP11P59045 1033 aaKnown RBP26.92■■□□□ 1.9
CPNE1-217ENST00000439669 ADGRE1Q14246 886 aa26.92■■□□□ 1.9
CPNE1-217ENST00000439669 CTTNQ14247 550 aaKnown RBP26.92■■□□□ 1.9
CPNE1-217ENST00000439669 ZNF174Q15697 407 aa26.92■■□□□ 1.9
CPNE1-217ENST00000439669 TTC38Q5R3I4 469 aa26.92■■□□□ 1.9
CPNE1-217ENST00000439669 ODR4Q5SWX8 454 aa26.92■■□□□ 1.9
CPNE1-217ENST00000439669 SPRED2Q7Z698 418 aa26.92■■□□□ 1.9
CPNE1-217ENST00000439669 MTMR9Q96QG7 549 aa26.92■■□□□ 1.9
CPNE1-217ENST00000439669 WRAP73Q9P2S5 460 aaPredicted RBP26.92■■□□□ 1.9
CPNE1-217ENST00000439669 GPR32O75388 356 aa26.91■■□□□ 1.9
CPNE1-217ENST00000439669 GJB2P29033 226 aa26.91■■□□□ 1.9
CPNE1-217ENST00000439669 HTRA4P83105 476 aaPredicted RBP26.91■■□□□ 1.9
CPNE1-217ENST00000439669 TPH2Q8IWU9 490 aa26.91■■□□□ 1.9
CPNE1-217ENST00000439669 C4orf19Q8IY42 314 aa26.91■■□□□ 1.9
CPNE1-217ENST00000439669 LINC01599Q8WXQ3 324 aa26.91■■□□□ 1.9
CPNE1-217ENST00000439669 ZNF668Q96K58 619 aaPredicted RBP26.91■■□□□ 1.9
CPNE1-217ENST00000439669 EIF2AK1Q9BQI3 630 aaKnown RBP26.91■■□□□ 1.9
CPNE1-217ENST00000439669 ZSWIM4Q9H7M6 989 aa26.91■■□□□ 1.9
CPNE1-217ENST00000439669 ERVK-5Q9HDB9 667 aa26.91■■□□□ 1.9
CPNE1-217ENST00000439669 CYP26B1Q9NR63 512 aa26.91■■□□□ 1.9
CPNE1-217ENST00000439669 SMC3Q9UQE7 1217 aa26.91■■□□□ 1.9
CPNE1-217ENST00000439669 LINC01553A4QN01 128 aa26.9■■□□□ 1.9
CPNE1-217ENST00000439669 RFXAPO00287 272 aa26.9■■□□□ 1.9
CPNE1-217ENST00000439669 GPR182O15218 404 aa26.9■■□□□ 1.9
CPNE1-217ENST00000439669 NPEPPSP55786 919 aa26.9■■□□□ 1.9
CPNE1-217ENST00000439669 ORC2Q13416 577 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-217ENST00000439669 DRP2Q13474 957 aa26.9■■□□□ 1.9
CPNE1-217ENST00000439669 MCTP1Q6DN14 999 aa26.9■■□□□ 1.9
CPNE1-217ENST00000439669 CEP170P1Q96L14 293 aa26.9■■□□□ 1.9
CPNE1-217ENST00000439669 CEP89Q96ST8 783 aa26.9■■□□□ 1.9
CPNE1-217ENST00000439669 MTUS1Q9ULD2 1270 aa26.9■■□□□ 1.9
CPNE1-217ENST00000439669 ST3GAL5Q9UNP4 418 aa26.9■■□□□ 1.9
CPNE1-217ENST00000439669 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.9■■□□□ 1.9
CPNE1-217ENST00000439669 EPOPA6NHQ4 379 aa26.89■■□□□ 1.9
CPNE1-217ENST00000439669 OR52Z1P0C646 297 aa26.89■■□□□ 1.9
CPNE1-217ENST00000439669 U2AF2P26368 475 aaKnown RBP eCLIP26.89■■□□□ 1.93e-26■□□□□ 9.9
CPNE1-217ENST00000439669 YWHABP31946 246 aaKnown RBP26.89■■□□□ 1.9
CPNE1-217ENST00000439669 TRAPPC10P48553 1259 aa26.89■■□□□ 1.9
CPNE1-217ENST00000439669 DNM2P50570 870 aa26.89■■□□□ 1.9
CPNE1-217ENST00000439669 FAM228AQ86W67 206 aa26.89■■□□□ 1.9
CPNE1-217ENST00000439669 ZNF710Q8N1W2 664 aa26.89■■□□□ 1.9
CPNE1-217ENST00000439669 NEK9Q8TD19 979 aa26.89■■□□□ 1.9
CPNE1-217ENST00000439669 TGS1Q96RS0 853 aaKnown RBP26.89■■□□□ 1.9
CPNE1-217ENST00000439669 JPH2Q9BR39 696 aaPredicted RBP26.89■■□□□ 1.9
CPNE1-217ENST00000439669 ADAMTS10Q9H324 1103 aa26.89■■□□□ 1.9
CPNE1-217ENST00000439669 TMX1Q9H3N1 280 aa26.89■■□□□ 1.9
CPNE1-217ENST00000439669 POTEMA6NI47 508 aa26.88■■□□□ 1.89
CPNE1-217ENST00000439669 H3BQV1 296 aa26.88■■□□□ 1.89
CPNE1-217ENST00000439669 MAFO75444 373 aaPredicted RBP26.88■■□□□ 1.89
CPNE1-217ENST00000439669 IBSPP21815 317 aaPredicted RBP26.88■■□□□ 1.89
CPNE1-217ENST00000439669 GPC3P51654 580 aa26.88■■□□□ 1.89
CPNE1-217ENST00000439669 OTUD6AQ7L8S5 288 aa26.88■■□□□ 1.89
CPNE1-217ENST00000439669 RTN4RL1Q86UN2 441 aaPredicted RBP26.88■■□□□ 1.89
CPNE1-217ENST00000439669 SP7Q8TDD2 431 aaPredicted RBP26.88■■□□□ 1.89
CPNE1-217ENST00000439669 NLRP7Q8WX94 980 aa26.88■■□□□ 1.89
CPNE1-217ENST00000439669 SLC7A3Q8WY07 619 aa26.88■■□□□ 1.89
CPNE1-217ENST00000439669 TSPYL2Q9H2G4 693 aaPredicted RBP26.88■■□□□ 1.89
CPNE1-217ENST00000439669 IGKV6-21A0A0C4DH24 114 aa26.87■■□□□ 1.89
CPNE1-217ENST00000439669 DENND3A2RUS2 1198 aa26.87■■□□□ 1.89
CPNE1-217ENST00000439669 POLGP54098 1239 aaPredicted RBP26.87■■□□□ 1.89
CPNE1-217ENST00000439669 NBR1Q14596 966 aa26.87■■□□□ 1.89
CPNE1-217ENST00000439669 XKR9Q5GH70 373 aa26.87■■□□□ 1.89
CPNE1-217ENST00000439669 SLC17A8Q8NDX2 589 aa26.87■■□□□ 1.89
CPNE1-217ENST00000439669 PPM1EQ8WY54 764 aa26.87■■□□□ 1.89
CPNE1-217ENST00000439669 SUCLA2Q9P2R7 463 aaPredicted RBP26.87■■□□□ 1.89
CPNE1-217ENST00000439669 SLITRK3O94933 977 aa26.86■■□□□ 1.89
CPNE1-217ENST00000439669 ERVK-21P61565 698 aa26.86■■□□□ 1.89
CPNE1-217ENST00000439669 ZNF579Q8NAF0 562 aaKnown RBP26.86■■□□□ 1.89
CPNE1-217ENST00000439669 BMP2KQ9NSY1 1161 aaPredicted RBP26.86■■□□□ 1.89
CPNE1-217ENST00000439669 PPME1Q9Y570 386 aa26.86■■□□□ 1.89
CPNE1-217ENST00000439669 TTC3P53804 2025 aa26.85■■□□□ 1.89
CPNE1-217ENST00000439669 MGEA5O60502 916 aa26.85■■□□□ 1.89
CPNE1-217ENST00000439669 EIF4BP23588 611 aaKnown RBP26.85■■□□□ 1.89
CPNE1-217ENST00000439669 RFC5P40937 340 aa26.85■■□□□ 1.89
CPNE1-217ENST00000439669 TECP42680 631 aa26.85■■□□□ 1.89
CPNE1-217ENST00000439669 NPAS4Q8IUM7 802 aa26.85■■□□□ 1.89
CPNE1-217ENST00000439669 MICALL1Q8N3F8 863 aa26.85■■□□□ 1.89
CPNE1-217ENST00000439669 CCDC43Q96MW1 224 aaKnown RBP26.85■■□□□ 1.89
CPNE1-217ENST00000439669 ADAM2Q99965 735 aa26.85■■□□□ 1.89
CPNE1-217ENST00000439669 HSD17B14Q9BPX1 270 aa26.85■■□□□ 1.89
CPNE1-217ENST00000439669 C17orf80Q9BSJ5 609 aa26.85■■□□□ 1.89
CPNE1-217ENST00000439669 LRFN2Q9ULH4 789 aa26.85■■□□□ 1.89
CPNE1-217ENST00000439669 ZBTB39O15060 712 aa26.84■■□□□ 1.89
CPNE1-217ENST00000439669 GTPBP6O43824 516 aaPredicted RBP26.84■■□□□ 1.89
CPNE1-217ENST00000439669 STAG3L1P0CL83 205 aa26.84■■□□□ 1.89
CPNE1-217ENST00000439669 DARSP14868 501 aaKnown RBP26.84■■□□□ 1.89
CPNE1-217ENST00000439669 CDC42EP1Q00587 391 aa26.84■■□□□ 1.89
CPNE1-217ENST00000439669 FAM43BQ6ZT52 329 aaPredicted RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms