RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 LRRC71Q8N4P6 559 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 SLC7A3Q8WY07 619 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 DYDC2Q96IM9 177 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 CCDC43Q96MW1 224 aaKnown RBP11.72□□□□□ -0.53
MCF2L-216ENST00000439475 SCLT1Q96NL6 688 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 SAMD11Q96NU1 681 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 MTMR9Q96QG7 549 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 LXNQ9BS40 222 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 INO80BQ9C086 356 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-216ENST00000439475 PRDM12Q9H4Q4 367 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 AGO3Q9H9G7 860 aaKnown RBP11.72□□□□□ -0.53
MCF2L-216ENST00000439475 CYP26B1Q9NR63 512 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 STK24Q9Y6E0 443 aa11.72□□□□□ -0.53
MCF2L-216ENST00000439475 LOXHD1Q8IVV2 1947 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 GAS2O43903 313 aaKnown RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 MAFO75444 373 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 SLITRK3O94933 977 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 STBD1O95210 358 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 OR52Z1P0C646 297 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 XRCC6P12956 609 aaKnown RBP eCLIP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 ZSCAN20P17040 1043 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 U2AF2P26368 475 aaKnown RBP eCLIP11.71□□□□□ -0.532e-7■■□□□ 11.9
MCF2L-216ENST00000439475 YWHABP31946 246 aaKnown RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 RFC5P40937 340 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 POLGP54098 1239 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 HTRA4P83105 476 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 TAP1Q03518 808 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 MKRN4PQ13434 485 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 CTTNQ14247 550 aaKnown RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 KIZQ2M2Z5 673 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 XKR9Q5GH70 373 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 LARP1BQ659C4 914 aaKnown RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 TMCO2Q7Z6W1 182 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 TCP11Q8WWU5 503 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 ARNTL2Q8WYA1 636 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 TGS1Q96RS0 853 aaKnown RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 OSMRQ99650 979 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 EIF2AK1Q9BQI3 630 aaKnown RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 GCOM2Q9BZD3 368 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 OSBPL7Q9BZF2 842 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 RAB34Q9BZG1 259 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 C1orf112Q9NSG2 853 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 RGL1Q9NZL6 768 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 LRFN2Q9ULH4 789 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 ST3GAL5Q9UNP4 418 aa11.71□□□□□ -0.53
MCF2L-216ENST00000439475 NOC2LQ9Y3T9 749 aaKnown RBP11.71□□□□□ -0.53
MCF2L-216ENST00000439475 IGKV6-21A0A0C4DH24 114 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 DENND3A2RUS2 1198 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 LAD1O00515 517 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 ASAP2O43150 1006 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 GPR32O75388 356 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 PDCP20941 246 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 EIF4BP23588 611 aaKnown RBP11.7□□□□□ -0.54
MCF2L-216ENST00000439475 TECP42680 631 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 GPC3P51654 580 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 CYP4A11Q02928 519 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 SPIRE1Q08AE8 756 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 RILPL1Q5EBL4 403 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 ANO5Q75V66 913 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 FIBCD1Q8N539 461 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 LINC01465Q8N7H1 131 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 MAFAQ8NHW3 353 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-216ENST00000439475 NLRP7Q8WX94 980 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 PPP1R16BQ96T49 567 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 HSD17B14Q9BPX1 270 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 TMEM60Q9H2L4 133 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 CERS4Q9HA82 394 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 CDHR5Q9HBB8 845 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 ERVK-5Q9HDB9 667 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 ANKEF1Q9NU02 776 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 SUCLA2Q9P2R7 463 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-216ENST00000439475 PCDHB7Q9Y5E2 793 aa11.7□□□□□ -0.54
MCF2L-216ENST00000439475 LYPLA2O95372 231 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 CD2BP2O95400 341 aaKnown RBP11.69□□□□□ -0.54
MCF2L-216ENST00000439475 NPEPPSP55786 919 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 ERVK-21P61565 698 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 PDIA5Q14554 519 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 HAUS3Q68CZ6 603 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 PLA2G4FQ68DD2 849 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 SLC24A5Q71RS6 500 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 ZNF410Q86VK4 478 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 RHPN2Q8IUC4 686 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 NPAS4Q8IUM7 802 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 SLC17A8Q8NDX2 589 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 PSPC1Q8WXF1 523 aaKnown RBP11.69□□□□□ -0.54
MCF2L-216ENST00000439475 MTRQ99707 1265 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 SH2D3AQ9BRG2 576 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 TSPYL2Q9H2G4 693 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-216ENST00000439475 TUFT1Q9NNX1 390 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 RGS18Q9NS28 235 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 RWDD3Q9Y3V2 267 aa11.69□□□□□ -0.54
MCF2L-216ENST00000439475 LCHNA4D1U4 455 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 LINC01553A4QN01 128 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 TMEM150BA6NC51 233 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 WNT7AO00755 349 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 DGAT1O75907 488 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 DARSP14868 501 aaKnown RBP11.68□□□□□ -0.54
MCF2L-216ENST00000439475 MUTP22033 750 aa11.68□□□□□ -0.54
MCF2L-216ENST00000439475 SARSP49591 514 aaKnown RBP11.68□□□□□ -0.54
MCF2L-216ENST00000439475 CUL4AQ13619 759 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 1115.9 ms