RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 CALUO43852 315 aaPredicted RBP6.64□□□□□ -1.35
BDNF-210ENST00000438929 DNAJC8O75937 253 aaPredicted RBP6.64□□□□□ -1.35
BDNF-210ENST00000438929 IFNB1P01574 187 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 HMGB2P26583 209 aaKnown RBP6.64□□□□□ -1.35
BDNF-210ENST00000438929 TARSP26639 723 aaKnown RBP6.64□□□□□ -1.35
BDNF-210ENST00000438929 SERPINB4P48594 390 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 MRPS35P82673 323 aaKnown RBP6.64□□□□□ -1.35
BDNF-210ENST00000438929 PDCD2Q16342 344 aaPredicted RBP6.64□□□□□ -1.35
BDNF-210ENST00000438929 DBN1Q16643 649 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 KIAA1755Q5JYT7 1200 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 GUF1Q8N442 669 aaKnown RBP6.64□□□□□ -1.35
BDNF-210ENST00000438929 VTI1AQ96AJ9 217 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 CNOT8Q9UFF9 292 aaKnown RBP6.64□□□□□ -1.35
BDNF-210ENST00000438929 SALL4Q9UJQ4 1053 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 FRMD4BQ9Y2L6 1034 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 JCADQ9P266 1359 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 NALCNQ8IZF0 1738 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 A0A0G2JND7 137 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 USP17L3A6NCW0 530 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 USP17L4A6NCW7 530 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 ARHGAP42A6NI28 874 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 F8VZ95 297 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 MAP3K7O43318 606 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 ECEL1O95672 775 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 AGTP01019 485 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 CYP2D6P10635 497 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 GHRP10912 638 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 KCNJ1P48048 391 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 COG7P83436 770 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 CYP4A11Q02928 519 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 PABPC4Q13310 644 aaKnown RBP eCLIP6.64□□□□□ -1.35
BDNF-210ENST00000438929 HP1BP3Q5SSJ5 553 aaPredicted RBP6.64□□□□□ -1.35
BDNF-210ENST00000438929 BARGINQ6ZT62 677 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 USP17L1Q7RTZ2 530 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 ARHGAP24Q8N264 748 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 ANKRD35Q8N283 1001 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 NKX2-3Q8TAU0 364 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 MTRQ99707 1265 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 USTQ9Y2C2 406 aa6.64□□□□□ -1.35
BDNF-210ENST00000438929 A8MUI8 341 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 SPAG7O75391 227 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 SHBGP04278 402 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 FERP16591 822 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 SLC9A1P19634 815 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 KCNA3P22001 575 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 FLT3P36888 993 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 ADCY7P51828 1080 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 PKN1Q16512 942 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 SGO2Q562F6 1265 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 C10orf76Q5T2E6 689 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 MEI1Q5TIA1 1274 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 CCDC137Q6PK04 289 aaKnown RBP6.63□□□□□ -1.35
BDNF-210ENST00000438929 USP17L2Q6R6M4 530 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 TMC3Q7Z5M5 1100 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 MAPKAPK5Q8IW41 473 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.63□□□□□ -1.35
BDNF-210ENST00000438929 DYNLL2Q96FJ2 89 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 CCSER1Q9C0I3 900 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 PABPC3Q9H361 631 aaKnown RBP6.63□□□□□ -1.35
BDNF-210ENST00000438929 SEMA4AQ9H3S1 761 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 HAO1Q9UJM8 370 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 TRIM33Q9UPN9 1127 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 FRMPD2Q68DX3 1309 aaPredicted RBP6.63□□□□□ -1.35
BDNF-210ENST00000438929 SRCAPQ6ZRS2 3230 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 GYG2O15488 501 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 CHMP2AO43633 222 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 EXOC3O60645 756 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 GSTA1P08263 222 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 ATF2P15336 505 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 DRD4P21917 467 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 CDK17Q00537 523 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 CDR2Q01850 454 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 TMED1Q13445 227 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 ITIH4Q14624 930 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.63□□□□□ -1.35
BDNF-210ENST00000438929 FIGNQ5HY92 759 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 WLSQ5T9L3 541 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 CCDC174Q6PII3 467 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 PPP1R21Q6ZMI0 780 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 PHLDB2Q86SQ0 1253 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 ZSCAN29Q8IWY8 852 aaPredicted RBP6.63□□□□□ -1.35
BDNF-210ENST00000438929 B4GALNT2Q8NHY0 566 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 RAB3IL1Q8TBN0 382 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 ERP44Q9BS26 406 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 NT5C3AQ9H0P0 336 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 SEMA6BQ9H3T3 888 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 STK17AQ9UEE5 414 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 ANAPC4Q9UJX5 808 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 GGA2Q9UJY4 613 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 DNM3Q9UQ16 869 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 ATXN2Q99700 1313 aaKnown RBP6.63□□□□□ -1.35
BDNF-210ENST00000438929 TMEM94Q12767 1356 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 CFAP69A5D8W1 941 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 MYMKA6NI61 221 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 MEIS1O00470 390 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 UBTFL6P0CB48 400 aaPredicted RBP6.63□□□□□ -1.35
BDNF-210ENST00000438929 TROAPQ12815 778 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 PICALMQ13492 652 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 HLFQ16534 295 aa6.63□□□□□ -1.35
BDNF-210ENST00000438929 TSHZ1Q6ZSZ6 1077 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms