RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 KIF11P52732 1056 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 DUSP8Q13202 625 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 R3HDM1Q15032 1099 aaKnown RBP4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 PIK3R6Q5UE93 754 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 GRAMD4Q6IC98 578 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 TCTN3Q6NUS6 607 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 USP30Q70CQ3 517 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 HIPK4Q8NE63 616 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 CHST13Q8NET6 341 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 CFHR4Q92496 578 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 APPBP2Q92624 585 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 NINJ1Q92982 152 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 LMF1Q96S06 567 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 GPR20Q99678 358 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 CABP5Q9NP86 173 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 TSC22D4Q9Y3Q8 395 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 TESMINQ9Y4I5 508 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 CD2APQ9Y5K6 639 aa4.84□□□□□ -1.63
HMGB3P12-201ENST00000438745 WDR62O43379 1518 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 FOXS1O43638 330 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 PRLP01236 227 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 HMGCRP04035 888 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 INSRRP14616 1297 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 ADCY8P40145 1251 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 KCNQ1P51787 676 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 RAC3P60763 192 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 HGFACQ04756 655 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 NOLC1Q14978 699 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 PCOLCEQ15113 449 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 TKFCQ3LXA3 575 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 CFAP100Q494V2 611 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 AGBL4Q5VU57 503 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 TAX1BP1Q86VP1 789 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 E2F7Q96AV8 911 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 MAML3Q96JK9 1138 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 GNRHR2Q96P88 292 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 KLC2Q9H0B6 622 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 SEMA4AQ9H3S1 761 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 FANCLQ9NW38 375 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 CDC42EP3Q9UKI2 254 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 SPO11Q9Y5K1 396 aa4.83□□□□□ -1.64
HMGB3P12-201ENST00000438745 ARHGAP6O43182 974 aa4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 F2P00734 622 aa4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 CR2P20023 1033 aa4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 PTX3P26022 381 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 MRE11P49959 708 aa4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 EPHA7Q15375 998 aa4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 Q6ZSN1 163 aa4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 OTOP2Q7RTS6 562 aa4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 KIAA0907Q7Z7F0 614 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 JAZF1Q86VZ6 243 aa4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 NME9Q86XW9 330 aa4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 WDR48Q8TAF3 677 aa4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 OR10A2Q9H208 303 aa4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 ZFR2Q9UPR6 939 aaKnown RBP4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 VWA7Q9Y334 891 aa4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 MRPL42Q9Y6G3 142 aaKnown RBP4.82□□□□□ -1.64
HMGB3P12-201ENST00000438745 H7C1D1 291 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 KRT37O76014 449 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 ATP2A2P16615 1042 aaKnown RBP4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 RRADP55042 308 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 ANTXR2P58335 489 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 DSG1Q02413 1049 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 DALRD3Q5D0E6 543 aaKnown RBP4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 KANSL1Q7Z3B3 1105 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 FILIP1Q7Z7B0 1213 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 NOP9Q86U38 636 aaKnown RBP4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 LRRTM3Q86VH5 581 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 KIAA1958Q8N8K9 716 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 EDAQ92838 391 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 LRRC37BQ96QE4 947 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 CDK5RAP1Q96SZ6 601 aaKnown RBP4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 ELF4Q99607 663 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 HAPLN2Q9GZV7 340 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 OAZ3Q9UMX2 235 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 NR2E1Q9Y466 385 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 CTDP1Q9Y5B0 961 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 SLC30A1Q9Y6M5 507 aa4.81□□□□□ -1.64
HMGB3P12-201ENST00000438745 HECW2Q9P2P5 1572 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 MATN3O15232 486 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 RAD17O75943 681 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 TNFRSF1AP19438 455 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 SLC9A1P19634 815 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 RGS3P49796 1198 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 SELENOPP49908 381 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 SLC6A3Q01959 620 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 ROM1Q03395 351 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 ADCY1Q08828 1119 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 PUM1Q14671 1186 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 ZNF174Q15697 407 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 C21orf62-AS1Q17RA5 79 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 ZNF568Q3ZCX4 644 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 TTC38Q5R3I4 469 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 FUKQ8N0W3 1084 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 ERCC4Q92889 916 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 NKD2Q969F2 451 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 KIAA1683Q9H0B3 1180 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 TMPRSS5Q9H3S3 457 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 DEF6Q9H4E7 631 aa4.8□□□□□ -1.64
HMGB3P12-201ENST00000438745 OXSMQ9NWU1 459 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms