RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 SUGCTQ9HAC7 445 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 ANKEF1Q9NU02 776 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 CDY2AQ9Y6F7 541 aa18.03■□□□□ 0.48
SNRPB-202ENST00000438552 RSPH10B2B2RC85 870 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 MAFO75444 373 aaPredicted RBP18.02■□□□□ 0.48
SNRPB-202ENST00000438552 CHRNA1P02708 482 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 RSPH10BP0C881 870 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 MUTP22033 750 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 RFC5P40937 340 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 GRB10Q13322 594 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 GPNMBQ14956 572 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 EMC2Q15006 297 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 ATL3Q6DD88 541 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 KCNK18Q7Z418 384 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 SLC7A3Q8WY07 619 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 VWCEQ96DN2 955 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 PNMA5Q96PV4 448 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 NACC1Q96RE7 527 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 OSBPL7Q9BZF2 842 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 DHX33Q9H6R0 707 aaKnown RBP18.02■□□□□ 0.48
SNRPB-202ENST00000438552 IL23AQ9NPF7 189 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 AKT3Q9Y243 479 aa18.02■□□□□ 0.48
SNRPB-202ENST00000438552 RANBP2P49792 3224 aaKnown RBP18.01■□□□□ 0.47
SNRPB-202ENST00000438552 IGKV6-21A0A0C4DH24 114 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 E9PMD0 336 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 USO1O60763 962 aaKnown RBP18.01■□□□□ 0.47
SNRPB-202ENST00000438552 NBNO60934 754 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 RFC2P35250 354 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 UBA7P41226 1012 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 MKRN4PQ13434 485 aaPredicted RBP18.01■□□□□ 0.47
SNRPB-202ENST00000438552 TMEM119Q4V9L6 283 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 FAM26DQ5JW98 314 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 HYIQ5T013 277 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 USP49Q70CQ1 688 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 SYMPKQ92797 1274 aaKnown RBP18.01■□□□□ 0.47
SNRPB-202ENST00000438552 CDK5RAP3Q96JB5 506 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 MAP7D2Q96T17 732 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 PRO3102Q9H379 93 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 DBR1Q9UK59 544 aaKnown RBP18.01■□□□□ 0.47
SNRPB-202ENST00000438552 CFAP45Q9UL16 551 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 PPME1Q9Y570 386 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 ATP6V1DQ9Y5K8 247 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 TRPV2Q9Y5S1 764 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 MICAL3Q7RTP6 2002 aa18.01■□□□□ 0.47
SNRPB-202ENST00000438552 ARHGEF35A5YM69 484 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 M0QZ92 97 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 PPP6R2O75170 966 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 RPLP2P05387 115 aaKnown RBP18■□□□□ 0.47
SNRPB-202ENST00000438552 TMOD1P28289 359 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 KRT85P78386 507 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 KARSQ15046 597 aaKnown RBP18■□□□□ 0.47
SNRPB-202ENST00000438552 KIZQ2M2Z5 673 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 C16orf59Q7L2K0 433 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 RASSF8Q8NHQ8 419 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 KCNG4Q8TDN1 519 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 EPSTI1Q96J88 318 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 ZNF668Q96K58 619 aaPredicted RBP18■□□□□ 0.47
SNRPB-202ENST00000438552 BHMT2Q9H2M3 363 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 XPNPEP1Q9NQW7 623 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 GINS2Q9Y248 185 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 PTPRSQ13332 1948 aa18■□□□□ 0.47
SNRPB-202ENST00000438552 GHRP10912 638 aa17.99■□□□□ 0.47
SNRPB-202ENST00000438552 XRCC6P12956 609 aaKnown RBP eCLIP17.99■□□□□ 0.47
SNRPB-202ENST00000438552 PLCG1P19174 1290 aa17.99■□□□□ 0.47
SNRPB-202ENST00000438552 C9orf50Q5SZB4 431 aa17.99■□□□□ 0.47
SNRPB-202ENST00000438552 IER5Q5VY09 327 aa17.99■□□□□ 0.47
SNRPB-202ENST00000438552 NME8Q8N427 588 aa17.99■□□□□ 0.47
SNRPB-202ENST00000438552 LRRC15Q8TF66 581 aa17.99■□□□□ 0.47
SNRPB-202ENST00000438552 TMEM143Q96AN5 459 aa17.99■□□□□ 0.47
SNRPB-202ENST00000438552 CALML4Q96GE6 196 aa17.99■□□□□ 0.47
SNRPB-202ENST00000438552 MTRQ99707 1265 aa17.99■□□□□ 0.47
SNRPB-202ENST00000438552 JPH2Q9BR39 696 aaPredicted RBP17.99■□□□□ 0.47
SNRPB-202ENST00000438552 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.99■□□□□ 0.474e-8■■□□□ 13.1
SNRPB-202ENST00000438552 CELF4Q9BZC1 486 aaKnown RBP17.99■□□□□ 0.47
SNRPB-202ENST00000438552 NT5C3AQ9H0P0 336 aa17.99■□□□□ 0.47
SNRPB-202ENST00000438552 CDHR5Q9HBB8 845 aa17.99■□□□□ 0.47
SNRPB-202ENST00000438552 ATP6V0A4Q9HBG4 840 aa17.99■□□□□ 0.47
SNRPB-202ENST00000438552 CIZ1Q9ULV3 898 aaPredicted RBP17.99■□□□□ 0.47
SNRPB-202ENST00000438552 COLQQ9Y215 455 aaPredicted RBP17.99■□□□□ 0.47
SNRPB-202ENST00000438552 CUTAO60888 179 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 DGAT1O75907 488 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 PARNO95453 639 aaKnown RBP17.98■□□□□ 0.47
SNRPB-202ENST00000438552 EYA4O95677 639 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 CXCL10P02778 98 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 BMP8BP34820 402 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 ME1P48163 572 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 DNM2P50570 870 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 LPIN1Q14693 890 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 TCTN1Q2MV58 587 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 FBXO47Q5MNV8 452 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 TMEM240Q5SV17 173 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 PSRC1Q6PGN9 363 aaPredicted RBP17.98■□□□□ 0.47
SNRPB-202ENST00000438552 ZNF365Q70YC5 407 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 LEO1Q8WVC0 666 aaPredicted RBP17.98■□□□□ 0.47
SNRPB-202ENST00000438552 SPATA32Q96LK8 384 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 OSMRQ99650 979 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 CCSER1Q9C0I3 900 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 SUCLA2Q9P2R7 463 aaPredicted RBP17.98■□□□□ 0.47
SNRPB-202ENST00000438552 DNM3Q9UQ16 869 aa17.98■□□□□ 0.47
SNRPB-202ENST00000438552 MYH11P35749 1972 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms