RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 MTHFD1LQ6UB35 978 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 SLC39A5Q6ZMH5 540 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 SV2BQ7L1I2 683 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 DYMQ7RTS9 669 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 ERCC4Q92889 916 aaPredicted RBP18.67■□□□□ 0.58
CALD1-209ENST00000436461 PAGE5Q96GU1 130 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 BLZF1Q9H2G9 400 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 SUGCTQ9HAC7 445 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 GPRC5CQ9NQ84 441 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 XPNPEP1Q9NQW7 623 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 KBTBD4Q9NVX7 518 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 TUBE1Q9UJT0 475 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 COL1A2P08123 1366 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 B4GALT4O60513 344 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 HOXC8P31273 242 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 CLCN3P51790 818 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 EMC2Q15006 297 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 RUFY4Q6ZNE9 571 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 C1orf186Q6ZWK4 172 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 NECAB2Q7Z6G3 386 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 METTL13Q8N6R0 699 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 SLC43A3Q8NBI5 491 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 TMEM143Q96AN5 459 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 CTAGE1Q96RT6 745 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 PYM1Q9BRP8 204 aaKnown RBP18.67■□□□□ 0.58
CALD1-209ENST00000436461 TRPV6Q9H1D0 765 aa18.67■□□□□ 0.58
CALD1-209ENST00000436461 DHX33Q9H6R0 707 aaKnown RBP18.67■□□□□ 0.58
CALD1-209ENST00000436461 RRN3P2A6NIE6 340 aa18.66■□□□□ 0.58
CALD1-209ENST00000436461 RSPH10B2B2RC85 870 aa18.66■□□□□ 0.58
CALD1-209ENST00000436461 PQBP1O60828 265 aaKnown RBP18.66■□□□□ 0.58
CALD1-209ENST00000436461 KINO60870 393 aaKnown RBP18.66■□□□□ 0.58
CALD1-209ENST00000436461 MAFO75444 373 aaPredicted RBP18.66■□□□□ 0.58
CALD1-209ENST00000436461 RSPH10BP0C881 870 aa18.66■□□□□ 0.58
CALD1-209ENST00000436461 CAMK4Q16566 473 aa18.66■□□□□ 0.58
CALD1-209ENST00000436461 EFCAB12Q6NXP0 572 aa18.66■□□□□ 0.58
CALD1-209ENST00000436461 SESTD1Q86VW0 696 aa18.66■□□□□ 0.58
CALD1-209ENST00000436461 KCTD17Q8N5Z5 321 aa18.66■□□□□ 0.58
CALD1-209ENST00000436461 WNT8BQ93098 351 aa18.66■□□□□ 0.58
CALD1-209ENST00000436461 TNMDQ9H2S6 317 aa18.66■□□□□ 0.58
CALD1-209ENST00000436461 CUEDC2Q9H467 287 aa18.66■□□□□ 0.58
CALD1-209ENST00000436461 ALPK3Q96L96 1907 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 DGAT1O75907 488 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 CDK7P50613 346 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 MKRN4PQ13434 485 aaPredicted RBP18.65■□□□□ 0.58
CALD1-209ENST00000436461 CUL4BQ13620 913 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 PTGISQ16647 500 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 LRRC26Q2I0M4 334 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 TRIM60Q495X7 471 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 UBE2Q1Q7Z7E8 422 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 SLC7A3Q8WY07 619 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 DDX12PQ92771 950 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 PPP1R16BQ96T49 567 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 REEP2Q9BRK0 252 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 FAM49AQ9H0Q0 323 aaPredicted RBP18.65■□□□□ 0.58
CALD1-209ENST00000436461 ATP6V0A4Q9HBG4 840 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 PDLIM7Q9NR12 457 aa18.65■□□□□ 0.58
CALD1-209ENST00000436461 MBLAC1A4D2B0 266 aaPredicted RBP18.64■□□□□ 0.57
CALD1-209ENST00000436461 SFI1A8K8P3 1242 aa18.64■□□□□ 0.57
CALD1-209ENST00000436461 KRT18P05783 430 aaKnown RBP18.64■□□□□ 0.57
CALD1-209ENST00000436461 CYP2C9P11712 490 aa18.64■□□□□ 0.57
CALD1-209ENST00000436461 PNOCQ13519 176 aa18.64■□□□□ 0.57
CALD1-209ENST00000436461 FAM102BQ5T8I3 360 aa18.64■□□□□ 0.57
CALD1-209ENST00000436461 SH3RF1Q7Z6J0 888 aa18.64■□□□□ 0.57
CALD1-209ENST00000436461 ZNF668Q96K58 619 aaPredicted RBP18.64■□□□□ 0.57
CALD1-209ENST00000436461 PCDH10Q9P2E7 1040 aa18.64■□□□□ 0.57
CALD1-209ENST00000436461 USP25Q9UHP3 1055 aa18.64■□□□□ 0.57
CALD1-209ENST00000436461 IGKV6-21A0A0C4DH24 114 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 HIP1RO75146 1068 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 GNAT1P11488 350 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 RFC5P40937 340 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 TMEM62Q0P6H9 643 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 GIT2Q14161 759 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 FAM126BQ8IXS8 530 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 DAW1Q8N136 415 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 DNAJB3Q8WWF6 145 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 TRIM9Q9C026 710 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 NOD1Q9Y239 953 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 ATP11BQ9Y2G3 1177 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 MBD3O95983 291 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 VTNP04004 478 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 PTPN11Q06124 597 aaPredicted RBP18.63■□□□□ 0.57
CALD1-209ENST00000436461 KSR1Q8IVT5 923 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 LINC01465Q8N7H1 131 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 DNAJC19Q96DA6 116 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 TIGD1Q96MW7 591 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 POLR3FQ9H1D9 316 aaPredicted RBP18.63■□□□□ 0.57
CALD1-209ENST00000436461 ZHX3Q9H4I2 956 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 MAGEF1Q9HAY2 307 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 PCDHA2Q9Y5H9 948 aa18.63■□□□□ 0.57
CALD1-209ENST00000436461 MAGEB2O15479 319 aa18.62■□□□□ 0.57
CALD1-209ENST00000436461 GUCY2CP25092 1073 aa18.62■□□□□ 0.57
CALD1-209ENST00000436461 RTP1P59025 263 aa18.62■□□□□ 0.57
CALD1-209ENST00000436461 ASIC1P78348 528 aa18.62■□□□□ 0.57
CALD1-209ENST00000436461 MDM2Q00987 491 aaPredicted RBP18.62■□□□□ 0.57
CALD1-209ENST00000436461 TLE2Q04725 743 aa18.62■□□□□ 0.57
CALD1-209ENST00000436461 MAPK7Q13164 816 aa18.62■□□□□ 0.57
CALD1-209ENST00000436461 SNX17Q15036 470 aa18.62■□□□□ 0.57
CALD1-209ENST00000436461 POSTNQ15063 836 aa18.62■□□□□ 0.57
CALD1-209ENST00000436461 RETREG2Q8NC44 543 aa18.62■□□□□ 0.57
CALD1-209ENST00000436461 DHX38Q92620 1227 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms