RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 LARSQ9P2J5 1176 aaKnown RBP17.16■□□□□ 0.34
RBFOX1-205ENST00000436368 CCPG1Q9ULG6 757 aa17.16■□□□□ 0.34
RBFOX1-205ENST00000436368 FAN1Q9Y2M0 1017 aa17.16■□□□□ 0.34
RBFOX1-205ENST00000436368 PSME4Q14997 1843 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 KIF13BQ9NQT8 1826 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 CNTNAP1P78357 1384 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 P4HA2O15460 535 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 HSF2BPO75031 334 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 RNF40O75150 1001 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 HOXD13P35453 343 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 JAG1P78504 1218 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 PTK2Q05397 1052 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 ODR4Q5SWX8 454 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 ALKBH5Q6P6C2 394 aaKnown RBP17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 MIER3Q7Z3K6 550 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 SYCP3Q8IZU3 236 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 ANKRD13CQ8N6S4 541 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 TMEM174Q8WUU8 243 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 STK33Q9BYT3 514 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 NAGPAQ9UK23 515 aa17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 DBR1Q9UK59 544 aaKnown RBP17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 DIS3Q9Y2L1 958 aaKnown RBP17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 CTDP1Q9Y5B0 961 aaPredicted RBP17.15■□□□□ 0.34
RBFOX1-205ENST00000436368 TNS1Q9HBL0 1735 aaKnown RBP17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 RSPH10B2B2RC85 870 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 P4HBP07237 508 aaKnown RBP17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 RSPH10BP0C881 870 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 SLC9A1P19634 815 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 KLRC1P26715 233 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 RXRBP28702 533 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 ACTN2P35609 894 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 NOP2P46087 812 aaKnown RBP17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 GHRHRQ02643 423 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 PPFIA1Q13136 1202 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 RRP1BQ14684 758 aaKnown RBP17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 ZNF720Q7Z2F6 126 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 PRPF38AQ8NAV1 312 aaKnown RBP17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 PIGOQ8TEQ8 1089 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 LXNQ9BS40 222 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 UNC45AQ9H3U1 944 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 SUGCTQ9HAC7 445 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 ZCCHC17Q9NP64 241 aaKnown RBP17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 TBC1D22BQ9NU19 505 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 ZNRF3Q9ULT6 936 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 RPTORQ8N122 1335 aa17.14■□□□□ 0.33
RBFOX1-205ENST00000436368 ZMYM2Q9UBW7 1377 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 CCDC188H7C350 402 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 MAPK13O15264 365 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 TGFB1I1O43294 461 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 RPS6KA5O75582 802 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 CAPN2P17655 700 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 SOX5P35711 763 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 FMO5P49326 533 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 MYL7Q01449 175 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 MAP3K10Q02779 954 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 PPP2R5EQ16537 467 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 INTS8Q75QN2 995 aaKnown RBP17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 SND1Q7KZF4 910 aaKnown RBP eCLIP17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 ZNF571Q7Z3V5 609 aaPredicted RBP17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 CYP2W1Q8TAV3 490 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 WHAMMQ8TF30 809 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 ACCSQ96QU6 501 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 LRRC1Q9BTT6 524 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 AGPAT3Q9NRZ7 376 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 DMAC2Q9NW81 257 aa17.13■□□□□ 0.33
RBFOX1-205ENST00000436368 NCK2O43639 380 aa17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 LYPLA2O95372 231 aa17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 ACTN1P12814 892 aa17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 PTGER2P43116 358 aa17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 MATR3P43243 847 aaKnown RBP eCLIP17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 XRRA1Q6P2D8 792 aa17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 B3GNT9Q6UX72 402 aa17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 C12orf56Q8IXR9 622 aa17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 BORCS6Q96GS4 357 aa17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 NAP1L3Q99457 506 aaPredicted RBP17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 FAM204AQ9H8W3 233 aa17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 SIX2Q9NPC8 291 aa17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 SALL4Q9UJQ4 1053 aa17.12■□□□□ 0.33
RBFOX1-205ENST00000436368 PGRMC1O00264 195 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 CLIC2O15247 247 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 EXOC3O60645 756 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 DKC1O60832 514 aaKnown RBP eCLIP17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 RAD17O75943 681 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 KIF4AO95239 1232 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 FTCDO95954 541 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 NMT1P30419 496 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 JAK3P52333 1124 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 ENOX2Q16206 610 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 ZSCAN26Q16670 478 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 PCNX4Q63HM2 1172 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 DPY19L2P1Q6NXN4 242 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 RDM1Q8NG50 284 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 FAM76AQ8TAV0 307 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 ACTRT1Q8TDG2 376 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 HVCN1Q96D96 273 aa17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 INPP4AQ96PE3 977 aaPredicted RBP17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 INTS2Q9H0H0 1204 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 RBM12Q9NTZ6 932 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 SUCLA2Q9P2R7 463 aaPredicted RBP17.11■□□□□ 0.33
RBFOX1-205ENST00000436368 EXOC7Q9UPT5 735 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms