RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 SMOC2Q9H3U7 446 aa17.16■□□□□ 0.34
NELFE-204ENST00000436289 DIAPH3Q9NSV4 1193 aa17.16■□□□□ 0.34
NELFE-204ENST00000436289 IGSF9Q9P2J2 1179 aa17.16■□□□□ 0.34
NELFE-204ENST00000436289 WNT16Q9UBV4 365 aa17.16■□□□□ 0.34
NELFE-204ENST00000436289 SEC63Q9UGP8 760 aaKnown RBP17.16■□□□□ 0.34
NELFE-204ENST00000436289 DUSP12Q9UNI6 340 aa17.16■□□□□ 0.34
NELFE-204ENST00000436289 IRAK3Q9Y616 596 aa17.16■□□□□ 0.34
NELFE-204ENST00000436289 CEP250Q9BV73 2442 aa17.16■□□□□ 0.34
NELFE-204ENST00000436289 HBP1O60381 514 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 CXCL14O95715 111 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 FGFR1P11362 822 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 ALDH7A1P49419 539 aaKnown RBP17.15■□□□□ 0.34
NELFE-204ENST00000436289 NONOQ15233 471 aaKnown RBP eCLIP17.15■□□□□ 0.34
NELFE-204ENST00000436289 RARS2Q5T160 578 aaKnown RBP17.15■□□□□ 0.34
NELFE-204ENST00000436289 CWC27Q6UX04 472 aaKnown RBP17.15■□□□□ 0.34
NELFE-204ENST00000436289 CATIPQ7Z7H3 387 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 PPFIBP1Q86W92 1011 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 KIAA0319LQ8IZA0 1049 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 RUBCNQ92622 972 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 MAP3K14Q99558 947 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 LZTS2Q9BRK4 669 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 PSTPIP2Q9H939 334 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 ACACBO00763 2458 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 NFASCO94856 1347 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 DMXL1Q9Y485 3027 aa17.15■□□□□ 0.34
NELFE-204ENST00000436289 SPDYE3A6NKU9 549 aa17.14■□□□□ 0.33
NELFE-204ENST00000436289 IFIT3O14879 490 aaKnown RBP17.14■□□□□ 0.33
NELFE-204ENST00000436289 ZSCAN20P17040 1043 aaPredicted RBP17.14■□□□□ 0.33
NELFE-204ENST00000436289 ZNF484Q5JVG2 852 aa17.14■□□□□ 0.33
NELFE-204ENST00000436289 LRRC55Q6ZSA7 311 aa17.14■□□□□ 0.33
NELFE-204ENST00000436289 TEX2Q8IWB9 1127 aa17.14■□□□□ 0.33
NELFE-204ENST00000436289 SLC39A11Q8N1S5 342 aa17.14■□□□□ 0.33
NELFE-204ENST00000436289 CYP2W1Q8TAV3 490 aa17.14■□□□□ 0.33
NELFE-204ENST00000436289 TRAPPC12Q8WVT3 735 aa17.14■□□□□ 0.33
NELFE-204ENST00000436289 SPZ1Q9BXG8 430 aa17.14■□□□□ 0.33
NELFE-204ENST00000436289 STK39Q9UEW8 545 aa17.14■□□□□ 0.33
NELFE-204ENST00000436289 COL1A2P08123 1366 aa17.14■□□□□ 0.33
NELFE-204ENST00000436289 LAMA4Q16363 1823 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 ATG7O95352 703 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 KIF5BP33176 963 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 POLGP54098 1239 aaPredicted RBP17.13■□□□□ 0.33
NELFE-204ENST00000436289 ACTR2P61160 394 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 DSC3Q14574 896 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 CCDC149Q6ZUS6 474 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 SIX5Q8N196 739 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 TMEM40Q8WWA1 233 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 TMEM169Q96HH4 297 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 HINFPQ9BQA5 517 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 MRPL9Q9BYD2 267 aaKnown RBP17.13■□□□□ 0.33
NELFE-204ENST00000436289 KCNK12Q9HB15 430 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 HCSTQ9UBK5 93 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 CDH22Q9UJ99 828 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 OTOGLQ3ZCN5 2332 aa17.13■□□□□ 0.33
NELFE-204ENST00000436289 LOXHD1Q8IVV2 1947 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 STK25O00506 426 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 GNAQP50148 359 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 TBC1D8BQ0IIM8 1120 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 WTAPQ15007 396 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 FAM160B1Q5W0V3 765 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 CYB5R4Q7L1T6 521 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 CABP7Q86V35 215 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 GPR161Q8N6U8 529 aaKnown RBP17.12■□□□□ 0.33
NELFE-204ENST00000436289 NXPE3Q969Y0 559 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 CDHR5Q9HBB8 845 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 KCNH7Q9NS40 1196 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 PKD2L1Q9P0L9 805 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 DNAH14Q0VDD8 3507 aa17.12■□□□□ 0.33
NELFE-204ENST00000436289 KMT2BQ9UMN6 2715 aaPredicted RBP17.11■□□□□ 0.33
NELFE-204ENST00000436289 IGKV6D-21A0A0A0MT36 114 aa17.11■□□□□ 0.33
NELFE-204ENST00000436289 WEE2P0C1S8 567 aa17.11■□□□□ 0.33
NELFE-204ENST00000436289 RFX1P22670 979 aa17.11■□□□□ 0.33
NELFE-204ENST00000436289 GPR149Q86SP6 731 aa17.11■□□□□ 0.33
NELFE-204ENST00000436289 FAM228AQ86W67 206 aa17.11■□□□□ 0.33
NELFE-204ENST00000436289 C12orf76Q8N812 135 aaPredicted RBP17.11■□□□□ 0.33
NELFE-204ENST00000436289 CTCFLQ8NI51 663 aaPredicted RBP17.11■□□□□ 0.33
NELFE-204ENST00000436289 MXRA8Q9BRK3 442 aa17.11■□□□□ 0.33
NELFE-204ENST00000436289 SFXN1Q9H9B4 322 aa17.11■□□□□ 0.33
NELFE-204ENST00000436289 KRT37O76014 449 aa17.1■□□□□ 0.33
NELFE-204ENST00000436289 CA8P35219 290 aa17.1■□□□□ 0.33
NELFE-204ENST00000436289 CYP26C1Q6V0L0 522 aa17.1■□□□□ 0.33
NELFE-204ENST00000436289 C15orf39Q6ZRI6 1047 aa17.1■□□□□ 0.33
NELFE-204ENST00000436289 ECHDC2Q86YB7 292 aa17.1■□□□□ 0.33
NELFE-204ENST00000436289 VPS52Q8N1B4 723 aa17.1■□□□□ 0.33
NELFE-204ENST00000436289 SLC22A17Q8WUG5 538 aa17.1■□□□□ 0.33
NELFE-204ENST00000436289 PIBF1Q8WXW3 757 aa17.1■□□□□ 0.33
NELFE-204ENST00000436289 CNTNAP3BQ96NU0 1288 aa17.1■□□□□ 0.33
NELFE-204ENST00000436289 CNTNAP3Q9BZ76 1288 aa17.1■□□□□ 0.33
NELFE-204ENST00000436289 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
NELFE-204ENST00000436289 A0A0U1RQF3 1178 aa17.09■□□□□ 0.33
NELFE-204ENST00000436289 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.09■□□□□ 0.33
NELFE-204ENST00000436289 CTSAP10619 480 aa17.09■□□□□ 0.33
NELFE-204ENST00000436289 HDAC1Q13547 482 aaPredicted RBP17.09■□□□□ 0.33
NELFE-204ENST00000436289 KIZQ2M2Z5 673 aa17.09■□□□□ 0.33
NELFE-204ENST00000436289 PHLDB3Q6NSJ2 640 aa17.09■□□□□ 0.33
NELFE-204ENST00000436289 DDX53Q86TM3 631 aaKnown RBP17.09■□□□□ 0.33
NELFE-204ENST00000436289 OSMRQ99650 979 aa17.09■□□□□ 0.33
NELFE-204ENST00000436289 ZBP1Q9H171 429 aa17.09■□□□□ 0.33
NELFE-204ENST00000436289 OSBPL3Q9H4L5 887 aa17.09■□□□□ 0.33
NELFE-204ENST00000436289 RNF19AQ9NV58 838 aa17.09■□□□□ 0.33
NELFE-204ENST00000436289 PCDHA6Q9UN73 950 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms