RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 KIF1CO43896 1103 aaKnown RBP11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 SARNPP82979 210 aaKnown RBP11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 BMT2Q1RMZ1 405 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 EMBQ6PCB8 327 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 CCDC174Q6PII3 467 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 OTOP1Q7RTM1 612 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 EFCAB13Q8IY85 973 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 LRRC57Q8N9N7 239 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 OLIG1Q8TAK6 271 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 FAM76AQ8TAV0 307 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 BORCS6Q96GS4 357 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 TMX4Q9H1E5 349 aaPredicted RBP11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 TSKSQ9UJT2 592 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 BCS1LQ9Y276 419 aa11.37□□□□□ -0.59
CLSTN1-203ENST00000435891 TBCAO75347 108 aaKnown RBP11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 EYA4O95677 639 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 FOSP01100 380 aaPredicted RBP11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 RBM26Q5T8P6 1007 aaKnown RBP11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 KCTD16Q68DU8 428 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 EGFL6Q8IUX8 553 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 USP38Q8NB14 1042 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 AKT1S1Q96B36 256 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 BRWD3Q6RI45 1802 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 SLX4Q8IY92 1834 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 DDX3XO00571 662 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 CALUO43852 315 aaPredicted RBP11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 ZBTB48P10074 688 aaPredicted RBP11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 JAM2P57087 298 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 BTNL9Q6UXG8 535 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 RNF217Q8TC41 542 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 CAVIN3Q969G5 261 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 FIZ1Q96SL8 496 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 MRIQ9BWK5 157 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 LUC7LQ9NQ29 371 aaKnown RBP11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 CLRN2A0PK11 232 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 YDJCA8MPS7 323 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 TCP10L2B9ZVM9 353 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 GFPT2O94808 682 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 ZYXQ15942 572 aaKnown RBP11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 C1orf186Q6ZWK4 172 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 MYCT1Q8N699 235 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 PIK3R5Q8WYR1 880 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 POLR3CQ9BUI4 534 aaPredicted RBP11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 AP1M1Q9BXS5 423 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 SERPINA10Q9UK55 444 aa11.36□□□□□ -0.59
CLSTN1-203ENST00000435891 A0A087WUV0 522 aaPredicted RBP11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 SLC26A4O43511 780 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 PSMD10O75832 226 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 KIF4AO95239 1232 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 EPB41P11171 864 aaKnown RBP11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 TNFRSF8P28908 595 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 CCDC43Q96MW1 224 aaKnown RBP11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 TMEM59LQ9UK28 342 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 NENFQ9UMX5 172 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 ZBTB12Q9Y330 459 aaPredicted RBP11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 ZNF646O15015 1829 aaPredicted RBP11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 ZNF233A6NK53 670 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 SHOX2O60902 331 aaPredicted RBP11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 CYP3A4P08684 503 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 IRAK1P51617 712 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 RPS6KA1Q15418 735 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 CBWD6Q4V339 395 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 CBWD3Q5JTY5 395 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 CBWD5Q5RIA9 395 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 DDX42Q86XP3 938 aaKnown RBP eCLIP11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 RNF14Q9UBS8 474 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 TMCO5BA8MYB1 307 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 LRRN2O75325 713 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 TRIM49P0CI25 452 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 TRIM49CP0CI26 452 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 ARP10275 920 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 NF2P35240 595 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 PRKCIP41743 596 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 STAT2P52630 851 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 HDLBPQ00341 1268 aaKnown RBP11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 GLE1Q53GS7 698 aaKnown RBP11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 IFT20Q8IY31 132 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 METTL13Q8N6R0 699 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 TPCN2Q8NHX9 752 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 LNX1Q8TBB1 728 aaPredicted RBP11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 RUBCNQ92622 972 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 OLFML3Q9NRN5 406 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 GRIN2DO15399 1336 aa11.35□□□□□ -0.59
CLSTN1-203ENST00000435891 ATRNL1Q5VV63 1379 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 CEP104O60308 925 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 FAM13AO94988 1023 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 ERVK-9P63128 1117 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 IQCKQ8N0W5 287 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 OSGEPQ9NPF4 335 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 FBXO28Q9NVF7 368 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 PIK3CDO00329 1044 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 EVI5O60447 810 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 ITGA4P13612 1032 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 CCT5P48643 541 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 CYP2J2P51589 502 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 PPARDQ03181 441 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 FAM186BQ8IYM0 893 aa11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 U2AF1L4Q8WU68 220 aaKnown RBP11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 GLIS2Q9BZE0 524 aaPredicted RBP11.34□□□□□ -0.59
CLSTN1-203ENST00000435891 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms