RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 DYMQ7RTS9 669 aa25.78■■□□□ 1.72
SMARCAL1-208ENST00000434435 C7orf31Q8N865 590 aa25.78■■□□□ 1.72
SMARCAL1-208ENST00000434435 MCPH1Q8NEM0 835 aa25.78■■□□□ 1.72
SMARCAL1-208ENST00000434435 SLC7A3Q8WY07 619 aa25.78■■□□□ 1.72
SMARCAL1-208ENST00000434435 VTI1AQ96AJ9 217 aa25.78■■□□□ 1.72
SMARCAL1-208ENST00000434435 JPH2Q9BR39 696 aaPredicted RBP25.78■■□□□ 1.72
SMARCAL1-208ENST00000434435 DHX33Q9H6R0 707 aaKnown RBP25.78■■□□□ 1.72
SMARCAL1-208ENST00000434435 NRCAMQ92823 1304 aa25.78■■□□□ 1.72
SMARCAL1-208ENST00000434435 CAPN2P17655 700 aa25.77■■□□□ 1.72
SMARCAL1-208ENST00000434435 CASP1P29466 404 aa25.77■■□□□ 1.72
SMARCAL1-208ENST00000434435 DPYDQ12882 1025 aa25.77■■□□□ 1.72
SMARCAL1-208ENST00000434435 EMC2Q15006 297 aa25.77■■□□□ 1.72
SMARCAL1-208ENST00000434435 NBPF20Q3BBV1 942 aa25.77■■□□□ 1.72
SMARCAL1-208ENST00000434435 TRAPPC12Q8WVT3 735 aa25.77■■□□□ 1.72
SMARCAL1-208ENST00000434435 HDAC6Q9UBN7 1215 aa25.77■■□□□ 1.72
SMARCAL1-208ENST00000434435 MAGEB2O15479 319 aa25.76■■□□□ 1.71
SMARCAL1-208ENST00000434435 GAS2O43903 313 aaKnown RBP25.76■■□□□ 1.71
SMARCAL1-208ENST00000434435 SMC2O95347 1197 aa25.76■■□□□ 1.71
SMARCAL1-208ENST00000434435 GNAT1P11488 350 aa25.76■■□□□ 1.71
SMARCAL1-208ENST00000434435 RAD51AP2Q09MP3 1159 aa25.76■■□□□ 1.71
SMARCAL1-208ENST00000434435 LMBR1Q8WVP7 490 aa25.76■■□□□ 1.71
SMARCAL1-208ENST00000434435 DNAJC19Q96DA6 116 aa25.76■■□□□ 1.71
SMARCAL1-208ENST00000434435 REEP2Q9BRK0 252 aa25.76■■□□□ 1.71
SMARCAL1-208ENST00000434435 STARD7Q9NQZ5 370 aa25.76■■□□□ 1.71
SMARCAL1-208ENST00000434435 SETD4Q9NVD3 440 aa25.76■■□□□ 1.71
SMARCAL1-208ENST00000434435 ODF2LQ9ULJ1 636 aa25.76■■□□□ 1.71
SMARCAL1-208ENST00000434435 NPHP3-ACAD11A0A0J9YXS1 232 aa25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 C17orf102A2RUQ5 167 aa25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 TBCAO75347 108 aaKnown RBP25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 MAFO75444 373 aaPredicted RBP25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 C22orf31O95567 290 aa25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 ITGA7Q13683 1181 aa25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 GIT2Q14161 759 aa25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 NFRKBQ6P4R8 1299 aa25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 SESTD1Q86VW0 696 aa25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 ANKLE1Q8NAG6 615 aa25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 PPP1R13LQ8WUF5 828 aa25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 SMARCE1Q969G3 411 aa25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 CCDC47Q96A33 483 aaKnown RBP25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 PDLIM7Q9NR12 457 aa25.75■■□□□ 1.71
SMARCAL1-208ENST00000434435 A0A0U1RQG5 324 aaPredicted RBP25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 IDEP14735 1019 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 KLRC1P26715 233 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 CACNB1Q02641 598 aaPredicted RBP25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 FAM47CQ5HY64 1035 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 UNC13DQ70J99 1090 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 MAEAQ7L5Y9 396 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 CCDC65Q8IXS2 484 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 RETREG2Q8NC44 543 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 ERCC4Q92889 916 aaPredicted RBP25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 DRC1Q96MC2 740 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 XPNPEP1Q9NQW7 623 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 KIAA1468Q9P260 1216 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 GTF2IRD1Q9UHL9 959 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 TUBE1Q9UJT0 475 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 PCDHA5Q9Y5H7 936 aa25.74■■□□□ 1.71
SMARCAL1-208ENST00000434435 HIP1RO75146 1068 aa25.73■■□□□ 1.71
SMARCAL1-208ENST00000434435 FAM13AO94988 1023 aa25.73■■□□□ 1.71
SMARCAL1-208ENST00000434435 RPN1P04843 607 aaKnown RBP25.73■■□□□ 1.71
SMARCAL1-208ENST00000434435 HOXC8P31273 242 aa25.73■■□□□ 1.71
SMARCAL1-208ENST00000434435 PTPN11Q06124 597 aaPredicted RBP25.73■■□□□ 1.71
SMARCAL1-208ENST00000434435 FAM102BQ5T8I3 360 aa25.73■■□□□ 1.71
SMARCAL1-208ENST00000434435 MTHFD1LQ6UB35 978 aa25.73■■□□□ 1.71
SMARCAL1-208ENST00000434435 RBM43Q6ZSC3 357 aaKnown RBP25.73■■□□□ 1.71
SMARCAL1-208ENST00000434435 GRIN2DO15399 1336 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 IGKV6-21A0A0C4DH24 114 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 PVALEFA0A1B0GWK0 134 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 RSPH10B2B2RC85 870 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 RSPH10BP0C881 870 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 ADAM17P78536 824 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 MARCH8Q5T0T0 291 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 TCP11Q8WWU5 503 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 KIFAP3Q92845 792 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 GSDMAQ96QA5 445 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 SEZ6LQ9BYH1 1024 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 ZHX3Q9H4I2 956 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 EXOC1Q9NV70 894 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 PANK4Q9NVE7 773 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 RMND1Q9NWS8 449 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 COL4A3BPQ9Y5P4 624 aa25.72■■□□□ 1.71
SMARCAL1-208ENST00000434435 FRMD3A2A2Y4 597 aa25.71■■□□□ 1.71
SMARCAL1-208ENST00000434435 MBLAC1A4D2B0 266 aaPredicted RBP25.71■■□□□ 1.71
SMARCAL1-208ENST00000434435 KLRC4O43908 158 aa25.71■■□□□ 1.71
SMARCAL1-208ENST00000434435 LETM1O95202 739 aaPredicted RBP25.71■■□□□ 1.71
SMARCAL1-208ENST00000434435 MAPK7Q13164 816 aa25.71■■□□□ 1.71
SMARCAL1-208ENST00000434435 IER5Q5VY09 327 aa25.71■■□□□ 1.71
SMARCAL1-208ENST00000434435 EFCAB12Q6NXP0 572 aa25.71■■□□□ 1.71
SMARCAL1-208ENST00000434435 METTL13Q8N6R0 699 aa25.71■■□□□ 1.71
SMARCAL1-208ENST00000434435 SPATA20Q8TB22 786 aa25.71■■□□□ 1.71
SMARCAL1-208ENST00000434435 POLR3FQ9H1D9 316 aaPredicted RBP25.71■■□□□ 1.71
SMARCAL1-208ENST00000434435 SUGCTQ9HAC7 445 aa25.71■■□□□ 1.71
SMARCAL1-208ENST00000434435 GPRC5CQ9NQ84 441 aa25.71■■□□□ 1.71
SMARCAL1-208ENST00000434435 SIP14410 1827 aa25.7■■□□□ 1.71
SMARCAL1-208ENST00000434435 GAP43P17677 238 aa25.7■■□□□ 1.7
SMARCAL1-208ENST00000434435 TMOD1P28289 359 aa25.7■■□□□ 1.7
SMARCAL1-208ENST00000434435 MNX1P50219 401 aaPredicted RBP25.7■■□□□ 1.7
SMARCAL1-208ENST00000434435 DNM2P50570 870 aa25.7■■□□□ 1.7
SMARCAL1-208ENST00000434435 ZNF131P52739 623 aa25.7■■□□□ 1.7
SMARCAL1-208ENST00000434435 COASYQ13057 564 aa25.7■■□□□ 1.7
SMARCAL1-208ENST00000434435 KCNB1Q14721 858 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms