RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 DNAJB1P25685 340 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 MXI1P50539 228 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 PTK2Q05397 1052 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 PIK3AP1Q6ZUJ8 805 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 PHLDB2Q86SQ0 1253 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 FBXO11Q86XK2 927 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 CAVIN3Q969G5 261 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 PGM2Q96G03 612 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 RAB3IPQ96QF0 476 aaPredicted RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 SAMSN1Q9NSI8 373 aaKnown RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 NRBP2Q9NSY0 501 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 AIPL1Q9NZN9 384 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 NSFL1CQ9UNZ2 370 aaKnown RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 AGTP01019 485 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 SRGAP2BP0DMP2 458 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 PNPLA4P41247 253 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 ASIC2Q16515 512 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 UGP2Q16851 508 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 AGBL2Q5U5Z8 902 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 ELMSAN1Q6PJG2 1045 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 SH3RF1Q7Z6J0 888 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 LRRC49Q8IUZ0 686 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF398Q8TD17 642 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 LRRC39Q96DD0 335 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 PAGE5Q96GU1 130 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 CARD6Q9BX69 1037 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 SEC16AO15027 2179 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 EXOC3O60645 756 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 MCM7P33993 719 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 BTDP43251 543 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 CABP7Q86V35 215 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 REM2Q8IYK8 340 aaPredicted RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 ACTRT1Q8TDG2 376 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 STN1Q9H668 368 aaKnown RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 USP21Q9UK80 565 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 H2AFYO75367 372 aaKnown RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 ZFXP17010 805 aaPredicted RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 MAGEA1P43355 309 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 ANTXR2P58335 489 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 LACTBP83111 547 aaPredicted RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 PTP4A2Q12974 167 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 RASA2Q15283 850 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 DHX40Q8IX18 779 aaKnown RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 EFCC1Q9HA90 598 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 GCNT4Q9P109 453 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 ZMYM5Q9UJ78 669 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 FRMD3A2A2Y4 597 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 GUCY2CP25092 1073 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 POU5F1BQ06416 359 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 DLGAP5Q15398 846 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 CERKLQ49MI3 558 aaPredicted RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 PDIK1LQ8N165 341 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 TTLL6Q8N841 843 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 FNIP1Q8TF40 1166 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 CNOT6LQ96LI5 555 aaKnown RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 RTFDC1Q9BY42 306 aaPredicted RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 GSTTP1A0A1W2PQM5 241 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 IQCA1LA6NCM1 817 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF487B1APH4 448 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 TFDP2Q14188 446 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 OTUD7BQ6GQQ9 843 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 SCG3Q8WXD2 468 aaKnown RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 DHX58Q96C10 678 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 AVENQ9NQS1 362 aaPredicted RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 TCRBV5S4A2TA0A5A2 114 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 DCTN3O75935 186 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 NR3C1P04150 777 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 ABHD2P08910 425 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 IREB2P48200 963 aaKnown RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 ADAM9Q13443 819 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 CHRNA2Q15822 529 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 PHLDB3Q6NSJ2 640 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF365Q70YC5 407 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 NLRP9Q7RTR0 991 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 TBC1D10CQ8IV04 446 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 DPF2Q92785 391 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 FAM84BQ96KN1 310 aaPredicted RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 CEP295NLQ96MC4 621 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 CDK5RAP1Q96SZ6 601 aaKnown RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 SCNN1AP37088 669 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 CDK16Q00536 496 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 TERF2Q15554 542 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 KRT24Q2M2I5 525 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 KLHL38Q2WGJ6 581 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 FAM83BQ5T0W9 1011 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 ZPBP2Q6X784 338 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 LCORLQ8N3X6 602 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 GSTA1P08263 222 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 PNMA6AP0CW24 399 aaPredicted RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 PTPN7P35236 360 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 LRCH2Q5VUJ6 765 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 MSL1Q68DK7 614 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 EFL1Q7Z2Z2 1120 aaKnown RBP4.06□□□□□ -1.76
SHPRH-205ENST00000433355 FAM151AQ8WW52 585 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 Q9H521 79 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 CYP26B1Q9NR63 512 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 SSX2IPQ9Y2D8 614 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 FAN1Q9Y2M0 1017 aa4.06□□□□□ -1.76
SHPRH-205ENST00000433355 KIF1CO43896 1103 aaKnown RBP4.05□□□□□ -1.76
SHPRH-205ENST00000433355 CD2BP2O95400 341 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms