RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 ZNF541Q9H0D2 1346 aa16.07■□□□□ 0.16
RFTN1-203ENST00000432519 ANO9A1A5B4 782 aa16.07■□□□□ 0.16
RFTN1-203ENST00000432519 EPB41P11171 864 aaKnown RBP16.07■□□□□ 0.16
RFTN1-203ENST00000432519 MTMR1Q13613 665 aa16.07■□□□□ 0.16
RFTN1-203ENST00000432519 PGM5Q15124 567 aa16.07■□□□□ 0.16
RFTN1-203ENST00000432519 SLC18A3Q16572 532 aa16.07■□□□□ 0.16
RFTN1-203ENST00000432519 CBWD6Q4V339 395 aa16.07■□□□□ 0.16
RFTN1-203ENST00000432519 CBWD3Q5JTY5 395 aa16.07■□□□□ 0.16
RFTN1-203ENST00000432519 CBWD5Q5RIA9 395 aa16.07■□□□□ 0.16
RFTN1-203ENST00000432519 TLR10Q9BXR5 811 aa16.07■□□□□ 0.16
RFTN1-203ENST00000432519 GPRC5CQ9NQ84 441 aa16.07■□□□□ 0.16
RFTN1-203ENST00000432519 JRKLQ9Y4A0 524 aa16.07■□□□□ 0.16
RFTN1-203ENST00000432519 ARHGEF35A5YM69 484 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 EIF3DO15371 548 aaKnown RBP eCLIP16.06■□□□□ 0.16
RFTN1-203ENST00000432519 TACC1O75410 805 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 CCNE2O96020 404 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 DNA2P51530 1060 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 TNFAIP1Q13829 316 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 BRD3Q15059 726 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 PCNX4Q63HM2 1172 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 FAM186BQ8IYM0 893 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 GOLPH3Q9H4A6 298 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 PACSIN2Q9UNF0 486 aaPredicted RBP16.06■□□□□ 0.16
RFTN1-203ENST00000432519 VWA5AO00534 786 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 BCRP11274 1271 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 ASIC2Q16515 512 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 TRERF1Q96PN7 1200 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 UBXN6Q9BZV1 441 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 ZMYND15Q9H091 742 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 PLCB1Q9NQ66 1216 aa16.06■□□□□ 0.16
RFTN1-203ENST00000432519 PEX10O60683 326 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 PPP1R37O75864 691 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 RPL13P26373 211 aaKnown RBP16.05■□□□□ 0.16
RFTN1-203ENST00000432519 RARRES1P49788 294 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 USP14P54578 494 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 GSPT2Q8IYD1 628 aaKnown RBP16.05■□□□□ 0.16
RFTN1-203ENST00000432519 TRPM4Q8TD43 1214 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 HDAC7Q8WUI4 952 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 MS4A14Q96JA4 679 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 OSBPL9Q96SU4 736 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 RMDN3Q96TC7 470 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 STRA6Q9BX79 667 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 PCIF1Q9H4Z3 704 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 L1RE1Q9UN81 338 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 POLR3GO15318 223 aaPredicted RBP16.05■□□□□ 0.16
RFTN1-203ENST00000432519 SLC16A3O15427 465 aaKnown RBP16.05■□□□□ 0.16
RFTN1-203ENST00000432519 FTCDO95954 541 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 MYBL2P10244 700 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 GUCY2CP25092 1073 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 HMGCS2P54868 508 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 NAP1L1P55209 391 aaKnown RBP16.05■□□□□ 0.16
RFTN1-203ENST00000432519 NPEPPSP55786 919 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 GHRHRQ02643 423 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 PTPROQ16827 1216 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 KIAA0753Q2KHM9 967 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 ANGEL2Q5VTE6 544 aaKnown RBP16.05■□□□□ 0.16
RFTN1-203ENST00000432519 PLA2G4FQ68DD2 849 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 IQCEQ6IPM2 695 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 TEX2Q8IWB9 1127 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 CAGE1Q8TC20 777 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 SPAG5Q96R06 1193 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 WRNIP1Q96S55 665 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 PDCD2LQ9BRP1 358 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 DMAC2Q9NW81 257 aa16.05■□□□□ 0.16
RFTN1-203ENST00000432519 COL11A1P12107 1806 aaPredicted RBP16.05■□□□□ 0.16
RFTN1-203ENST00000432519 H3BQF6 201 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 MAP2K7O14733 419 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 P4HBP07237 508 aaKnown RBP16.04■□□□□ 0.16
RFTN1-203ENST00000432519 DLG4P78352 724 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 BAATQ14032 418 aaPredicted RBP16.04■□□□□ 0.16
RFTN1-203ENST00000432519 ARHGAP27Q6ZUM4 889 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 GDAP1L1Q96MZ0 367 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 GBP3Q9H0R5 595 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 NUCKS1Q9H1E3 243 aaKnown RBP16.04■□□□□ 0.16
RFTN1-203ENST00000432519 ODF2LQ9ULJ1 636 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 RLFQ13129 1914 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 PARP14Q460N5 1801 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 TESPA1A2RU30 521 aaPredicted RBP16.04■□□□□ 0.16
RFTN1-203ENST00000432519 FZD9O00144 591 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 PALMO75781 387 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 PSMC2P35998 433 aaKnown RBP16.04■□□□□ 0.16
RFTN1-203ENST00000432519 GYS2P54840 703 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 BACE1P56817 501 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 GBP6Q6ZN66 633 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 RNF207Q6ZRF8 634 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 MCF2L2Q86YR7 1114 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 KCTD17Q8N5Z5 321 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 OLIG1Q8TAK6 271 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 HNRNPLLQ8WVV9 542 aaKnown RBP16.04■□□□□ 0.16
RFTN1-203ENST00000432519 METTL14Q9HCE5 456 aaKnown RBP16.04■□□□□ 0.16
RFTN1-203ENST00000432519 PXMP2Q9NR77 195 aa16.04■□□□□ 0.16
RFTN1-203ENST00000432519 K7ENM7 598 aa16.03■□□□□ 0.16
RFTN1-203ENST00000432519 BACH1O14867 736 aa16.03■□□□□ 0.16
RFTN1-203ENST00000432519 SORBS3O60504 671 aa16.03■□□□□ 0.16
RFTN1-203ENST00000432519 PTPRAP18433 802 aa16.03■□□□□ 0.16
RFTN1-203ENST00000432519 MATR3P43243 847 aaKnown RBP eCLIP16.03■□□□□ 0.16
RFTN1-203ENST00000432519 SOX10P56693 466 aa16.03■□□□□ 0.16
RFTN1-203ENST00000432519 JAM2P57087 298 aa16.03■□□□□ 0.16
RFTN1-203ENST00000432519 DMTNQ08495 405 aa16.03■□□□□ 0.16
RFTN1-203ENST00000432519 PRKG1Q13976 671 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms