RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 KLHL8Q9P2G9 620 aaPredicted RBP12.23□□□□□ -0.45
SEC16A-206ENST00000431893 SUN2Q9UH99 717 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 ADAM21Q9UKJ8 722 aa12.23□□□□□ -0.45
SEC16A-206ENST00000431893 LOC102724159A0A0B4J2E5 919 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 CCDC151A5D8V7 595 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 ARHGEF9O43307 516 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 TTLL1O95922 423 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 PWP2Q15269 919 aaKnown RBP12.22□□□□□ -0.45
SEC16A-206ENST00000431893 ZNF746Q6NUN9 644 aaPredicted RBP12.22□□□□□ -0.45
SEC16A-206ENST00000431893 MMS22LQ6ZRQ5 1243 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 RNF139Q8WU17 664 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 LMTK3Q96Q04 1460 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 KCNA4P22459 653 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 MYO1EQ12965 1108 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 ACAD11Q709F0 780 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 DTX3LQ8TDB6 740 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 ITSN2Q9NZM3 1697 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 CHGBP05060 677 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 ZBED6P86452 979 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 SMAD5Q99717 465 aaKnown RBP12.22□□□□□ -0.45
SEC16A-206ENST00000431893 ATG3Q9NT62 314 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 PCSK1NQ9UHG2 260 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 CFAP69A5D8W1 941 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 CTIFO43310 598 aaKnown RBP12.22□□□□□ -0.45
SEC16A-206ENST00000431893 FGFR4P22455 802 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 ANXA13P27216 316 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 COPS2P61201 443 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 FKBP3Q00688 224 aaKnown RBP12.22□□□□□ -0.45
SEC16A-206ENST00000431893 NUP160Q12769 1436 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 CUL3Q13618 768 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 KIAA1841Q6NSI8 718 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 PDIK1LQ8N165 341 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 PPM1NQ8N819 430 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 ICA1LQ8NDH6 482 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 PPHLN1Q8NEY8 458 aaKnown RBP12.22□□□□□ -0.45
SEC16A-206ENST00000431893 MAP4K1Q92918 833 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 PANX2Q96RD6 677 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 PRMT1Q99873 361 aaKnown RBP12.22□□□□□ -0.45
SEC16A-206ENST00000431893 FSD1LQ9BXM9 530 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 GOLPH3LQ9H4A5 285 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 KLHL11Q9NVR0 708 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 ZNF804BA4D1E1 1349 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 GOLGA8RI6L899 631 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 HAUS5O94927 633 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 HSPA6P17066 643 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 SLC27A3Q5K4L6 730 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 C1orf228Q6PIY5 440 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 NLRP14Q86W24 1093 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 PARVGQ9HBI0 331 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 AURKCQ9UQB9 309 aa12.22□□□□□ -0.45
SEC16A-206ENST00000431893 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.22□□□□□ -0.45
SEC16A-206ENST00000431893 LMNAP02545 664 aaKnown RBP12.21□□□□□ -0.45
SEC16A-206ENST00000431893 CUL1Q13616 776 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 DDIASQ8IXT1 998 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 DCPSQ96C86 337 aaKnown RBP12.21□□□□□ -0.45
SEC16A-206ENST00000431893 LRRC53A6NM62 1247 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 ZRANB2O95218 330 aaKnown RBP eCLIP12.21□□□□□ -0.453e-7■■□□□ 14
SEC16A-206ENST00000431893 TSPY1Q01534 308 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 AP1B1Q10567 949 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 EFTUD2Q15029 972 aaKnown RBP eCLIP12.21□□□□□ -0.451e-6■■■□□ 18.6
SEC16A-206ENST00000431893 USPL1Q5W0Q7 1092 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 TEX2Q8IWB9 1127 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 ATP6V0A1Q93050 837 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 RPF1Q9H9Y2 349 aaKnown RBP12.21□□□□□ -0.45
SEC16A-206ENST00000431893 DNAJC12Q9UKB3 198 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 NEK2P51955 445 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 AP2B1P63010 937 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 DCAF4L1Q3SXM0 396 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 ZMYM1Q5SVZ6 1142 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 ALKBH5Q6P6C2 394 aaKnown RBP12.21□□□□□ -0.45
SEC16A-206ENST00000431893 DSTYKQ6XUX3 929 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 ANKMY2Q8IV38 441 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 CCHCR1Q8TD31 782 aa12.21□□□□□ -0.45
SEC16A-206ENST00000431893 SH2B2O14492 632 aaPredicted RBP12.21□□□□□ -0.46
SEC16A-206ENST00000431893 PER1O15534 1290 aaPredicted RBP12.21□□□□□ -0.46
SEC16A-206ENST00000431893 TJP3O95049 919 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 CARSP49589 748 aaKnown RBP12.21□□□□□ -0.46
SEC16A-206ENST00000431893 GUCY1A3Q02108 690 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 IFT43Q96FT9 208 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 BTBD6Q96KE9 485 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 KIFC3Q9BVG8 833 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 ADNPQ9H2P0 1102 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 MAGEF1Q9HAY2 307 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 EIF4G3O43432 1585 aaKnown RBP12.21□□□□□ -0.46
SEC16A-206ENST00000431893 MYL1P05976 194 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 OCM2P0CE71 109 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 OCMP0CE72 109 aaPredicted RBP12.21□□□□□ -0.46
SEC16A-206ENST00000431893 EIF3BP55884 814 aaKnown RBP12.21□□□□□ -0.46
SEC16A-206ENST00000431893 RESTQ13127 1097 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 KCTD2Q14681 263 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 ICE2Q659A1 982 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 OLFML2BQ68BL8 750 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 THNSL1Q8IYQ7 743 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 IL17REQ8NFR9 667 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 FAM49AQ9H0Q0 323 aaPredicted RBP12.21□□□□□ -0.46
SEC16A-206ENST00000431893 TMEM206Q9H813 350 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 FAM135BQ49AJ0 1406 aa12.21□□□□□ -0.46
SEC16A-206ENST00000431893 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.46
SEC16A-206ENST00000431893 LAD1O00515 517 aa12.2□□□□□ -0.46
SEC16A-206ENST00000431893 ENO1P06733 434 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms