RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 DNAJC28Q9NX36 388 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 GALNT8Q9NY28 637 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 ZBTB21Q9ULJ3 1066 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 INVSQ9Y283 1065 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 PTPN22Q9Y2R2 807 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 MRFAP1Q9Y605 127 aa4.16□□□□□ -1.74
HMGB1P27-201ENST00000431429 A0A0A6YYJ9 748 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 GOLGA6CA6NDK9 693 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 GOLGA6BA6NDN3 693 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 PAPLNO95428 1278 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 IL18BPO95998 194 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 GLI1P08151 1106 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 ENO2P09104 434 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 GOLGA6DP0CG33 693 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 MTHFD2P13995 350 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 ITGB5P18084 799 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 CCND1P24385 295 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 IGFBP6P24592 240 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 RGS3P49796 1198 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 GP2P55259 537 aaKnown RBP4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 PFKPQ01813 784 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 SLC6A3Q01959 620 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 ROM1Q03395 351 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 CACNB2Q08289 660 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 MINDY4Q4G0A6 757 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 ATAT1Q5SQI0 421 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 EFCAB2Q5VUJ9 269 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 SLFN12LQ6IEE8 588 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 LRSAM1Q6UWE0 723 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 AMOTL1Q8IY63 956 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 PRR18Q8N4B5 295 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 HIPK4Q8NE63 616 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 PPP1R14CQ8TAE6 165 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 IGDCC4Q8TDY8 1250 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 AUTS2Q8WXX7 1259 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 CCDC136Q96JN2 1154 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 TAAR9Q96RI9 348 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 BTBD2Q9BX70 525 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 ANO3Q9BYT9 981 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 QRSL1Q9H0R6 528 aaKnown RBP4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 BCAS3Q9H6U6 928 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 SLC39A2Q9NP94 309 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 NGRNQ9NPE2 291 aaKnown RBP4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 INCENPQ9NQS7 918 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 UCKL1Q9NWZ5 548 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 GOLGA6AQ9NYA3 693 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 RBPJLQ9UBG7 517 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 PRSS50Q9UI38 385 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 SERPINB13Q9UIV8 391 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 MYPNQ86TC9 1320 aa4.15□□□□□ -1.75
HMGB1P27-201ENST00000431429 VSTM5A8MXK1 200 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 ERC2O15083 957 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 XPOTO43592 962 aaKnown RBP4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 OPHN1O60890 802 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 NDUFS2O75306 463 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 SEC24DO94855 1032 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 LPLP06858 475 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 POU2F2P09086 479 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 VIPR1P32241 457 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 STAT5AP42229 794 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 ECE1P42892 770 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 GPR15P49685 360 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 ADCY2Q08462 1091 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 UBE4AQ14139 1066 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 RTP5Q14D33 572 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 CCDC178Q5BJE1 867 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 ARTNQ5T4W7 220 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 MBNL2Q5VZF2 373 aaKnown RBP4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 TIGD7Q6NT04 549 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 CCDC62Q6P9F0 684 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 TTLL7Q6ZT98 887 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 CHST15Q7LFX5 561 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 BCL6BQ8N143 479 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 FAM43AQ8N2R8 423 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 FAM26EQ8N5C1 309 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 SLC35G2Q8TBE7 412 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 ALG3Q92685 438 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 HPS3Q969F9 1004 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 COA7Q96BR5 231 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 TUBGCP5Q96RT8 1024 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 PRDM11Q9NQV5 511 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 DDX21Q9NR30 783 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 DLL4Q9NR61 685 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 CHST12Q9NRB3 414 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 KCND1Q9NSA2 647 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 KCNG1Q9UIX4 513 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 CDY2AQ9Y6F7 541 aa4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 OAS3Q9Y6K5 1087 aaKnown RBP4.14□□□□□ -1.75
HMGB1P27-201ENST00000431429 A0A0A6YYK5 440 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 ZNF503-AS2A6NEH8 195 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 PEX10O60683 326 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 COL6A1P12109 1028 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 OSMP13725 252 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 TRIM27P14373 513 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 EDNRBP24530 442 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 SLC5A3P53794 718 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 BCAR1P56945 870 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 RHBDL3P58872 404 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 IL13RA1P78552 427 aa4.13□□□□□ -1.75
HMGB1P27-201ENST00000431429 ZNF200P98182 395 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms