RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 ARHGEF15O94989 841 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 UPP2O95045 317 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 ATP2B1P20020 1258 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 IGFBP4P22692 258 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 U2AF2P26368 475 aaKnown RBP eCLIP11□□□□□ -0.65
HDAC6-207ENST00000430858 TXKP42681 527 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 DNM2P50570 870 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 NLRP11P59045 1033 aaKnown RBP11□□□□□ -0.65
HDAC6-207ENST00000430858 ADGRE1Q14246 886 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 TMEM266Q2M3C6 531 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 OTUD6AQ7L8S5 288 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 EXOC8Q8IYI6 725 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 NEK9Q8TD19 979 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
HDAC6-207ENST00000430858 TMEM40Q8WWA1 233 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 ARNTL2Q8WYA1 636 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 TGS1Q96RS0 853 aaKnown RBP11□□□□□ -0.65
HDAC6-207ENST00000430858 OSMRQ99650 979 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 EIF2AK1Q9BQI3 630 aaKnown RBP11□□□□□ -0.65
HDAC6-207ENST00000430858 LXNQ9BS40 222 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 TSPYL2Q9H2G4 693 aaPredicted RBP11□□□□□ -0.65
HDAC6-207ENST00000430858 ADAMTS10Q9H324 1103 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 ZSWIM4Q9H7M6 989 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 CERS4Q9HA82 394 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 CDHR5Q9HBB8 845 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 ERVK-5Q9HDB9 667 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 CYP26B1Q9NR63 512 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 RNF216Q9NWF9 866 aaPredicted RBP11□□□□□ -0.65
HDAC6-207ENST00000430858 RGL1Q9NZL6 768 aa11□□□□□ -0.65
HDAC6-207ENST00000430858 NOL7Q9UMY1 257 aaKnown RBP11□□□□□ -0.65
HDAC6-207ENST00000430858 NOC2LQ9Y3T9 749 aaKnown RBP11□□□□□ -0.65
HDAC6-207ENST00000430858 ZSCAN21Q9Y5A6 473 aaPredicted RBP11□□□□□ -0.65
HDAC6-207ENST00000430858 MYH9P35579 1960 aaKnown RBP10.99□□□□□ -0.65
HDAC6-207ENST00000430858 TMEM150BA6NC51 233 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 MAFO75444 373 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-207ENST00000430858 SLITRK3O94933 977 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 POU3F3P20264 500 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-207ENST00000430858 YWHABP31946 246 aaKnown RBP10.99□□□□□ -0.65
HDAC6-207ENST00000430858 GPC3P51654 580 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 ERVK-21P61565 698 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 CYP4A11Q02928 519 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 CTTNQ14247 550 aaKnown RBP10.99□□□□□ -0.65
HDAC6-207ENST00000430858 TTC38Q5R3I4 469 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 RTN4RL1Q86UN2 441 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-207ENST00000430858 FAM228AQ86W67 206 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 SLC17A8Q8NDX2 589 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 LINC01599Q8WXQ3 324 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 SLC7A3Q8WY07 619 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 DYDC2Q96IM9 177 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 CEP170P1Q96L14 293 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 SCLT1Q96NL6 688 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 SAMD11Q96NU1 681 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 PPP1R16BQ96T49 567 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 HSD17B14Q9BPX1 270 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 SH2D3AQ9BRG2 576 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 TMEM60Q9H2L4 133 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 TMX1Q9H3N1 280 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 C1orf112Q9NSG2 853 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 WRAP73Q9P2S5 460 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-207ENST00000430858 ST3GAL5Q9UNP4 418 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 MICAL3Q7RTP6 2002 aa10.99□□□□□ -0.65
HDAC6-207ENST00000430858 GBF1Q92538 1859 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 EPOPA6NHQ4 379 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 GTPBP6O43824 516 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-207ENST00000430858 GAS2O43903 313 aaKnown RBP10.98□□□□□ -0.65
HDAC6-207ENST00000430858 LYPLA2O95372 231 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 OR52Z1P0C646 297 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 STAG3L1P0CL83 205 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 EIF4BP23588 611 aaKnown RBP10.98□□□□□ -0.65
HDAC6-207ENST00000430858 GJB2P29033 226 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 RFC5P40937 340 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 POLGP54098 1239 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-207ENST00000430858 NPEPPSP55786 919 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 DRP2Q13474 957 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 ZNF174Q15697 407 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 PLA2G4FQ68DD2 849 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 SLC24A5Q71RS6 500 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 NPAS4Q8IUM7 802 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 TPH2Q8IWU9 490 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 NLRP7Q8WX94 980 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 RGS18Q9NS28 235 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 SUCLA2Q9P2R7 463 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-207ENST00000430858 SMC3Q9UQE7 1217 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 GTF3C3Q9Y5Q9 886 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 SIP14410 1827 aa10.98□□□□□ -0.65
HDAC6-207ENST00000430858 DENND3A2RUS2 1198 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 POTEMA6NI47 508 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 H3BQV1 296 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 RFXAPO00287 272 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 DGKIO75912 1065 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 DARSP14868 501 aaKnown RBP10.97□□□□□ -0.65
HDAC6-207ENST00000430858 SARSP49591 514 aaKnown RBP10.97□□□□□ -0.65
HDAC6-207ENST00000430858 XKR9Q5GH70 373 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 SPRED2Q7Z698 418 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 ZNF410Q86VK4 478 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 CRIPAKQ8N1N5 446 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 FIBCD1Q8N539 461 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 ZNF689Q96CS4 500 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-207ENST00000430858 ADAM2Q99965 735 aa10.97□□□□□ -0.65
HDAC6-207ENST00000430858 GCOM2Q9BZD3 368 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms