RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 KRT2P35908 639 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 NEK4P51957 841 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 PSMC5P62195 406 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 INF2Q27J81 1249 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 SPOUT1Q5T280 376 aaKnown RBP10.26□□□□□ -0.77
HDAC9-211ENST00000430454 OTUD6AQ7L8S5 288 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 BANK1Q8NDB2 785 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 RSPH1Q8WYR4 309 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 CLP1Q92989 425 aaKnown RBP10.26□□□□□ -0.77
HDAC9-211ENST00000430454 MBOAT7Q96N66 472 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 NIFKQ9BYG3 293 aaKnown RBP10.26□□□□□ -0.77
HDAC9-211ENST00000430454 UNC45AQ9H3U1 944 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 NSUN3Q9H649 340 aaKnown RBP10.26□□□□□ -0.77
HDAC9-211ENST00000430454 ATP6V0A4Q9HBG4 840 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 ERVK-5Q9HDB9 667 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 RGS18Q9NS28 235 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 SEPT9Q9UHD8 586 aaPredicted RBP10.26□□□□□ -0.77
HDAC9-211ENST00000430454 ST3GAL5Q9UNP4 418 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 KCNJ14Q9UNX9 436 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 NOC2LQ9Y3T9 749 aaKnown RBP10.26□□□□□ -0.77
HDAC9-211ENST00000430454 PCDHB12Q9Y5F1 795 aa10.26□□□□□ -0.77
HDAC9-211ENST00000430454 FSD2A1L4K1 749 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 DDX11L8A8MPP1 907 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 ZBTB42B2RXF5 422 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 M0R2N6 131 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 TDP2O95551 362 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 VTNP04004 478 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 SKIP12755 728 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 ATP4AP20648 1035 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 EIF4BP23588 611 aaKnown RBP10.25□□□□□ -0.77
HDAC9-211ENST00000430454 QARSP47897 775 aaKnown RBP10.25□□□□□ -0.77
HDAC9-211ENST00000430454 KIZQ2M2Z5 673 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 TMEM266Q2M3C6 531 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 ABI1Q8IZP0 508 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 NLRP7Q8WX94 980 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 SLC7A3Q8WY07 619 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 P2RX5Q93086 422 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 GTF3C6Q969F1 213 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 ZNF689Q96CS4 500 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-211ENST00000430454 ZBTB10Q96DT7 871 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 ADAM2Q99965 735 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 GCOM2Q9BZD3 368 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-211ENST00000430454 ELAC1Q9H777 363 aaKnown RBP10.25□□□□□ -0.77
HDAC9-211ENST00000430454 DACT1Q9NYF0 836 aa10.25□□□□□ -0.77
HDAC9-211ENST00000430454 ADAMTS3O15072 1205 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 P4HBP07237 508 aaKnown RBP10.24□□□□□ -0.77
HDAC9-211ENST00000430454 BMP1P13497 986 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 SFPQP23246 707 aaKnown RBP eCLIP10.24□□□□□ -0.77
HDAC9-211ENST00000430454 NLRP11P59045 1033 aaKnown RBP10.24□□□□□ -0.77
HDAC9-211ENST00000430454 UBE3AQ05086 875 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 PPP2R5CQ13362 524 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 MTERF2Q49AM1 385 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 KRT40Q6A162 431 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 PDE12Q6L8Q7 609 aaKnown RBP10.24□□□□□ -0.77
HDAC9-211ENST00000430454 PIK3AP1Q6ZUJ8 805 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 ETNPPLQ8TBG4 499 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 ZSCAN31Q96LW9 406 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-211ENST00000430454 CCDC43Q96MW1 224 aaKnown RBP10.24□□□□□ -0.77
HDAC9-211ENST00000430454 OSMRQ99650 979 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 OSBPL7Q9BZF2 842 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 UBE2ZQ9H832 354 aaPredicted RBP10.24□□□□□ -0.77
HDAC9-211ENST00000430454 CHST12Q9NRB3 414 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 TMEM161AQ9NX61 479 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 LIMCH1Q9UPQ0 1083 aa10.24□□□□□ -0.77
HDAC9-211ENST00000430454 SIP14410 1827 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 PTPRSQ13332 1948 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 GAS2O43903 313 aaKnown RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 GPR32O75388 356 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 MAFO75444 373 aaPredicted RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 EOMESO95936 686 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 IBSPP21815 317 aaPredicted RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 RFC5P40937 340 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 CLCN3P51790 818 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 FAM189BP81408 668 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 TFF2Q03403 129 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 NCBP1Q09161 790 aaKnown RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 BMS1Q14692 1282 aaKnown RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 LEXMQ3ZCV2 418 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 EP400NLQ6ZTU2 488 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 SPRED2Q7Z698 418 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 RTN4RL1Q86UN2 441 aaPredicted RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 ZNF410Q86VK4 478 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 LRRC71Q8N4P6 559 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 NEK9Q8TD19 979 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 TCP11Q8WWU5 503 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 PABPC5Q96DU9 382 aaKnown RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 AIFM3Q96NN9 605 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 LLPHQ9BRT6 129 aaKnown RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 TMX1Q9H3N1 280 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 ZSWIM4Q9H7M6 989 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 UPF2Q9HAU5 1272 aaKnown RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 RC3H2Q9HBD1 1191 aaKnown RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 KCNMB3Q9NPA1 279 aa10.23□□□□□ -0.77
HDAC9-211ENST00000430454 PUF60Q9UHX1 559 aaKnown RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 MRPL42Q9Y6G3 142 aaKnown RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 MYH9P35579 1960 aaKnown RBP10.23□□□□□ -0.77
HDAC9-211ENST00000430454 PRRC2BQ5JSZ5 2229 aaKnown RBP10.22□□□□□ -0.77
HDAC9-211ENST00000430454 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-211ENST00000430454 TBKBP1A7MCY6 615 aa10.22□□□□□ -0.77
HDAC9-211ENST00000430454 C9IYK1 514 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms