RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 PSAPP07602 524 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 IRS1P35568 1242 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 BMPR1AP36894 532 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 AK2P54819 239 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 HYAL1Q12794 435 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 NFX1Q12986 1120 aaKnown RBP13.32□□□□□ -0.28
HDAC4-202ENST00000430200 TARBP2Q15633 366 aaKnown RBP13.32□□□□□ -0.28
HDAC4-202ENST00000430200 INF2Q27J81 1249 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 Q4G0T1 1027 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 TIGD5Q53EQ6 642 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 MCTP2Q6DN12 878 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 ADGRD2Q7Z7M1 963 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 CKAP2LQ8IYA6 745 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 TRIM22Q8IYM9 498 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 NEK9Q8TD19 979 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 ADAMTS10Q9H324 1103 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 WRAP73Q9P2S5 460 aaPredicted RBP13.32□□□□□ -0.28
HDAC4-202ENST00000430200 VAV3Q9UKW4 847 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 ST3GAL5Q9UNP4 418 aa13.32□□□□□ -0.28
HDAC4-202ENST00000430200 DENND4AQ7Z401 1863 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 TDRD15B5MCY1 1934 aaKnown RBP13.31□□□□□ -0.28
HDAC4-202ENST00000430200 CYP3A7-CYP3A51PA0A087WV96 503 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 EML1O00423 815 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 PFKFB2O60825 505 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 RPS6KA5O75582 802 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 MMP1P03956 469 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 ITGB1P05556 798 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 FGFR1P11362 822 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 FDPSP14324 419 aaKnown RBP13.31□□□□□ -0.28
HDAC4-202ENST00000430200 FGFR4P22455 802 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 CYP3A7P24462 503 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 SARSP49591 514 aaKnown RBP13.31□□□□□ -0.28
HDAC4-202ENST00000430200 USP11P51784 963 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 AAK1Q2M2I8 961 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 LEXMQ3ZCV2 418 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 FAM102BQ5T8I3 360 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 CMTR2Q8IYT2 770 aaKnown RBP13.31□□□□□ -0.28
HDAC4-202ENST00000430200 METTL13Q8N6R0 699 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 NECAB1Q8N987 351 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 IL27Q8NEV9 243 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 RIT2Q99578 217 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 ADAM2Q99965 735 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 TEKT3Q9BXF9 490 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 FTHL17Q9BXU8 183 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 NSUN3Q9H649 340 aaKnown RBP13.31□□□□□ -0.28
HDAC4-202ENST00000430200 EPHX3Q9H6B9 360 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 C11orf16Q9NQ32 467 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 SAMM50Q9Y512 469 aa13.31□□□□□ -0.28
HDAC4-202ENST00000430200 PLXNA3P51805 1871 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 CPLX1O14810 134 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 CSDE1O75534 798 aaKnown RBP13.3□□□□□ -0.28
HDAC4-202ENST00000430200 RPLP2P05387 115 aaKnown RBP13.3□□□□□ -0.28
HDAC4-202ENST00000430200 ATF7P17544 494 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-202ENST00000430200 GPC3P51654 580 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 CRYBB1P53674 252 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-202ENST00000430200 NLRP11P59045 1033 aaKnown RBP13.3□□□□□ -0.28
HDAC4-202ENST00000430200 ME3Q16798 604 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 CTC1Q2NKJ3 1217 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 PLA2G4FQ68DD2 849 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 EFCAB12Q6NXP0 572 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 NME8Q8N427 588 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 ZNF579Q8NAF0 562 aaKnown RBP13.3□□□□□ -0.28
HDAC4-202ENST00000430200 KLHL23Q8NBE8 558 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 TNFRSF25Q93038 417 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 PABPC5Q96DU9 382 aaKnown RBP13.3□□□□□ -0.28
HDAC4-202ENST00000430200 C11orf84Q9BUA3 381 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-202ENST00000430200 KCNMB3Q9NPA1 279 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 RGS18Q9NS28 235 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 PPP4R2Q9NY27 417 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 SEPT9Q9UHD8 586 aaPredicted RBP13.3□□□□□ -0.28
HDAC4-202ENST00000430200 PLAGL2Q9UPG8 496 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 C2orf16Q68DN1 1984 aa13.3□□□□□ -0.28
HDAC4-202ENST00000430200 JAK2O60674 1132 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 GLP2RO95838 553 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 NEFLP07196 543 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 PBX3P40426 434 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 JAK3P52333 1124 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 RBM10P98175 930 aaKnown RBP13.29□□□□□ -0.28
HDAC4-202ENST00000430200 SPIRE1Q08AE8 756 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 NR5A1Q13285 461 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 NONOQ15233 471 aaKnown RBP eCLIP13.29□□□□□ -0.28
HDAC4-202ENST00000430200 CLUL1Q15846 466 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 PTPROQ16827 1216 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 MTERF2Q49AM1 385 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 PTCRAQ6ISU1 281 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-202ENST00000430200 POTEDQ86YR6 584 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 SPPL3Q8TCT6 385 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 HAS1Q92839 578 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 FAM167AQ96KS9 214 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 DDX25Q9UHL0 483 aaKnown RBP13.29□□□□□ -0.28
HDAC4-202ENST00000430200 AKT3Q9Y243 479 aa13.29□□□□□ -0.28
HDAC4-202ENST00000430200 KMT2EQ8IZD2 1858 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 GRXCR2A6NFK2 248 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 RB1P06400 928 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 SFNP31947 248 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 FOSBP53539 338 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 LETM2Q2VYF4 491 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 CLLU1OSQ5K130 101 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 MOXD1Q6UVY6 613 aa13.28□□□□□ -0.28
HDAC4-202ENST00000430200 LRRC55Q6ZSA7 311 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms