RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 LRRC71Q8N4P6 559 aa19.08■□□□□ 0.65
UBE3D-204ENST00000430071 FBXO22Q8NEZ5 403 aa19.08■□□□□ 0.65
UBE3D-204ENST00000430071 TNPO1Q92973 898 aaKnown RBP19.08■□□□□ 0.65
UBE3D-204ENST00000430071 MUC3AQ02505 3323 aa19.08■□□□□ 0.64
UBE3D-204ENST00000430071 EML1O00423 815 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 IBSPP21815 317 aaPredicted RBP19.07■□□□□ 0.64
UBE3D-204ENST00000430071 GATMP50440 423 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 PRKCEQ02156 737 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 KIZQ2M2Z5 673 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 LETM2Q2VYF4 491 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 TJAP1Q5JTD0 557 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 KRT25Q7Z3Z0 450 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 NME8Q8N427 588 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 METTL13Q8N6R0 699 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 LINC01465Q8N7H1 131 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 ZNF689Q96CS4 500 aaPredicted RBP19.07■□□□□ 0.64
UBE3D-204ENST00000430071 ASB2Q96Q27 587 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 ERVK-5Q9HDB9 667 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 TCEAL9Q9UHQ7 104 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 SQORQ9Y6N5 450 aa19.07■□□□□ 0.64
UBE3D-204ENST00000430071 M0QZ92 97 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 GPR32O75388 356 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 OATP04181 439 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 KCNQ1P51787 676 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 NFX1Q12986 1120 aaKnown RBP19.06■□□□□ 0.64
UBE3D-204ENST00000430071 PAK2Q13177 524 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 LARP1BQ659C4 914 aaKnown RBP19.06■□□□□ 0.64
UBE3D-204ENST00000430071 PIK3AP1Q6ZUJ8 805 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 MIER3Q7Z3K6 550 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 TMEM192Q8IY95 271 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 SPRYD3Q8NCJ5 442 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 OSMRQ99650 979 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 BRMS1Q9HCU9 246 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 DDX25Q9UHL0 483 aaKnown RBP19.06■□□□□ 0.64
UBE3D-204ENST00000430071 WNT7AO00755 349 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 DRP2Q13474 957 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 SAFBQ15424 915 aaKnown RBP eCLIP19.06■□□□□ 0.64
UBE3D-204ENST00000430071 EFCAB12Q6NXP0 572 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 MOXD1Q6UVY6 613 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 FAM228AQ86W67 206 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 BANK1Q8NDB2 785 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 ATXN2LQ8WWM7 1075 aaKnown RBP19.06■□□□□ 0.64
UBE3D-204ENST00000430071 CEP89Q96ST8 783 aa19.06■□□□□ 0.64
UBE3D-204ENST00000430071 TSPYL2Q9H2G4 693 aaPredicted RBP19.06■□□□□ 0.64
UBE3D-204ENST00000430071 CCDC194A0A1B0GVG4 234 aa19.05■□□□□ 0.64
UBE3D-204ENST00000430071 DGKIO75912 1065 aa19.05■□□□□ 0.64
UBE3D-204ENST00000430071 HSP90AA1P07900 732 aaKnown RBP19.05■□□□□ 0.64
UBE3D-204ENST00000430071 JAK3P52333 1124 aa19.05■□□□□ 0.64
UBE3D-204ENST00000430071 MRPS5P82675 430 aaKnown RBP19.05■□□□□ 0.64
UBE3D-204ENST00000430071 TARBP2Q15633 366 aaKnown RBP19.05■□□□□ 0.64
UBE3D-204ENST00000430071 NEK8Q86SG6 692 aa19.05■□□□□ 0.64
UBE3D-204ENST00000430071 HAS1Q92839 578 aa19.05■□□□□ 0.64
UBE3D-204ENST00000430071 NECAB3Q96P71 396 aaPredicted RBP19.05■□□□□ 0.64
UBE3D-204ENST00000430071 ST3GAL5Q9UNP4 418 aa19.05■□□□□ 0.64
UBE3D-204ENST00000430071 ADGRA3Q8IWK6 1321 aa19.04■□□□□ 0.64
UBE3D-204ENST00000430071 H3BQV1 296 aa19.04■□□□□ 0.64
UBE3D-204ENST00000430071 RPS6KA5O75582 802 aa19.04■□□□□ 0.64
UBE3D-204ENST00000430071 RPLP2P05387 115 aaKnown RBP19.04■□□□□ 0.64
UBE3D-204ENST00000430071 SFNP31947 248 aa19.04■□□□□ 0.64
UBE3D-204ENST00000430071 NLRP11P59045 1033 aaKnown RBP19.04■□□□□ 0.64
UBE3D-204ENST00000430071 GPM6BQ13491 265 aa19.04■□□□□ 0.64
UBE3D-204ENST00000430071 BECN1Q14457 450 aa19.04■□□□□ 0.64
UBE3D-204ENST00000430071 PAN2Q504Q3 1202 aaKnown RBP19.04■□□□□ 0.64
UBE3D-204ENST00000430071 POTEDQ86YR6 584 aa19.04■□□□□ 0.64
UBE3D-204ENST00000430071 FIBCD1Q8N539 461 aa19.04■□□□□ 0.64
UBE3D-204ENST00000430071 ADAMTS10Q9H324 1103 aa19.04■□□□□ 0.64
UBE3D-204ENST00000430071 FOXP1Q9H334 677 aaPredicted RBP19.04■□□□□ 0.64
UBE3D-204ENST00000430071 KCNMB3Q9NPA1 279 aa19.04■□□□□ 0.64
UBE3D-204ENST00000430071 NRBP2Q9NSY0 501 aa19.04■□□□□ 0.64
UBE3D-204ENST00000430071 WRAP73Q9P2S5 460 aaPredicted RBP19.04■□□□□ 0.64
UBE3D-204ENST00000430071 VAV3Q9UKW4 847 aa19.04■□□□□ 0.64
UBE3D-204ENST00000430071 H3BNC9 293 aa19.03■□□□□ 0.64
UBE3D-204ENST00000430071 CCNT1O60563 726 aaKnown RBP19.03■□□□□ 0.64
UBE3D-204ENST00000430071 BMP1P13497 986 aa19.03■□□□□ 0.64
UBE3D-204ENST00000430071 SYT1P21579 422 aa19.03■□□□□ 0.64
UBE3D-204ENST00000430071 FGFR4P22455 802 aa19.03■□□□□ 0.64
UBE3D-204ENST00000430071 CRYBB1P53674 252 aaPredicted RBP19.03■□□□□ 0.64
UBE3D-204ENST00000430071 MTERF2Q49AM1 385 aa19.03■□□□□ 0.64
UBE3D-204ENST00000430071 ZNF579Q8NAF0 562 aaKnown RBP19.03■□□□□ 0.64
UBE3D-204ENST00000430071 FAM167AQ96KS9 214 aa19.03■□□□□ 0.64
UBE3D-204ENST00000430071 ADAM2Q99965 735 aa19.03■□□□□ 0.64
UBE3D-204ENST00000430071 LMCD1Q9NZU5 365 aa19.03■□□□□ 0.64
UBE3D-204ENST00000430071 AKT3Q9Y243 479 aa19.03■□□□□ 0.64
UBE3D-204ENST00000430071 C5orf42Q9H799 3197 aa19.02■□□□□ 0.64
UBE3D-204ENST00000430071 CSDE1O75534 798 aaKnown RBP19.02■□□□□ 0.64
UBE3D-204ENST00000430071 PDCP20941 246 aa19.02■□□□□ 0.64
UBE3D-204ENST00000430071 U2AF2P26368 475 aaKnown RBP eCLIP19.02■□□□□ 0.64
UBE3D-204ENST00000430071 CTNNB1P35222 781 aa19.02■□□□□ 0.64
UBE3D-204ENST00000430071 BTG3Q14201 252 aaPredicted RBP19.02■□□□□ 0.64
UBE3D-204ENST00000430071 PLA2G4FQ68DD2 849 aa19.02■□□□□ 0.64
UBE3D-204ENST00000430071 NPAS4Q8IUM7 802 aa19.02■□□□□ 0.64
UBE3D-204ENST00000430071 NOSTRINQ8IVI9 506 aa19.02■□□□□ 0.64
UBE3D-204ENST00000430071 FTHL17Q9BXU8 183 aa19.02■□□□□ 0.64
UBE3D-204ENST00000430071 TSHZ2Q9NRE2 1034 aa19.02■□□□□ 0.64
UBE3D-204ENST00000430071 HCSTQ9UBK5 93 aa19.02■□□□□ 0.64
UBE3D-204ENST00000430071 SEPT9Q9UHD8 586 aaPredicted RBP19.02■□□□□ 0.64
UBE3D-204ENST00000430071 MRPL42Q9Y6G3 142 aaKnown RBP19.02■□□□□ 0.64
UBE3D-204ENST00000430071 DDX11L8A8MPP1 907 aa19.01■□□□□ 0.63
UBE3D-204ENST00000430071 GRM6O15303 877 aa19.01■□□□□ 0.63
UBE3D-204ENST00000430071 MAGEB2O15479 319 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms