RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 FLOT1O75955 427 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 GAP43P17677 238 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 USP14P54578 494 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 RPS6P62753 249 aaKnown RBP15.29■□□□□ 0.04
RBM39-212ENST00000429968 PTK2Q05397 1052 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 ZSWIM2Q8NEG5 633 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 TRIM58Q8NG06 486 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 ZKSCAN4Q969J2 545 aaPredicted RBP15.29■□□□□ 0.04
RBM39-212ENST00000429968 NACC1Q96RE7 527 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 TLR10Q9BXR5 811 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 AGO4Q9HCK5 861 aaKnown RBP15.29■□□□□ 0.04
RBM39-212ENST00000429968 BCS1LQ9Y276 419 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 TELO2Q9Y4R8 837 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 UBIAD1Q9Y5Z9 338 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 FAM170AA1A519 330 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 CLGNO14967 610 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 EIF3DO15371 548 aaKnown RBP eCLIP15.29■□□□□ 0.04
RBM39-212ENST00000429968 TGFB2P61812 414 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 KLHL30Q0D2K2 578 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 SF3B2Q13435 895 aaKnown RBP15.29■□□□□ 0.04
RBM39-212ENST00000429968 SLC18A3Q16572 532 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 EXOC3L4Q17RC7 722 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 FAM178BQ8IXR5 827 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 GSPT2Q8IYD1 628 aaKnown RBP15.29■□□□□ 0.04
RBM39-212ENST00000429968 OLIG1Q8TAK6 271 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 STRA6Q9BX79 667 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 RPAP3Q9H6T3 665 aaPredicted RBP15.29■□□□□ 0.04
RBM39-212ENST00000429968 JRKLQ9Y4A0 524 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 GJA3Q9Y6H8 435 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 ZHX2Q9Y6X8 837 aa15.29■□□□□ 0.04
RBM39-212ENST00000429968 ARID2Q68CP9 1835 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 TACC1O75410 805 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 PPP1R37O75864 691 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 TRIM49P0CI25 452 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 TRIM49CP0CI26 452 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 MYBL2P10244 700 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 EPB41P11171 864 aaKnown RBP15.28■□□□□ 0.04
RBM39-212ENST00000429968 CYP2J2P51589 502 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 TERF2Q15554 542 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 ASIC2Q16515 512 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 CBWD6Q4V339 395 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 CBWD3Q5JTY5 395 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 CBWD5Q5RIA9 395 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 ODR4Q5SWX8 454 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 MIER3Q7Z3K6 550 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 HNRNPLLQ8WVV9 542 aaKnown RBP15.28■□□□□ 0.04
RBM39-212ENST00000429968 ATG4CQ96DT6 458 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 OSBPL9Q96SU4 736 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 RIT2Q99578 217 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■□□□□ 8.8
RBM39-212ENST00000429968 EHMT1Q9H9B1 1298 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 PLCB1Q9NQ66 1216 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 AGPAT3Q9NRZ7 376 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 GCNT4Q9P109 453 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 PPP1R9AQ9ULJ8 1098 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 L1RE1Q9UN81 338 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 SLC16A3O15427 465 aaKnown RBP15.28■□□□□ 0.04
RBM39-212ENST00000429968 LRRN2O75325 713 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 JAM2P57087 298 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 GHRHRQ02643 423 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 PGM5Q15124 567 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 IQCEQ6IPM2 695 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 PADI6Q6TGC4 694 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 ARHGAP27Q6ZUM4 889 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 FAM186BQ8IYM0 893 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 HDAC7Q8WUI4 952 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 LPAR1Q92633 364 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 MS4A14Q96JA4 679 aa15.28■□□□□ 0.04
RBM39-212ENST00000429968 PACSIN2Q9UNF0 486 aaPredicted RBP15.28■□□□□ 0.04
RBM39-212ENST00000429968 ZNF541Q9H0D2 1346 aa15.27■□□□□ 0.04
RBM39-212ENST00000429968 POLR3GO15318 223 aaPredicted RBP15.27■□□□□ 0.04
RBM39-212ENST00000429968 CTNND1O60716 968 aaKnown RBP15.27■□□□□ 0.04
RBM39-212ENST00000429968 BCRP11274 1271 aa15.27■□□□□ 0.04
RBM39-212ENST00000429968 OAS2P29728 719 aaKnown RBP15.27■□□□□ 0.04
RBM39-212ENST00000429968 PCNX4Q63HM2 1172 aa15.27■□□□□ 0.04
RBM39-212ENST00000429968 GOLPH3Q9H4A6 298 aa15.27■□□□□ 0.04
RBM39-212ENST00000429968 DMAC2Q9NW81 257 aa15.27■□□□□ 0.04
RBM39-212ENST00000429968 CNOT7Q9UIV1 285 aaKnown RBP15.27■□□□□ 0.04
RBM39-212ENST00000429968 ARHGEF35A5YM69 484 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 ATP8B1O43520 1251 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 FTCDO95954 541 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 CCNE2O96020 404 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 MYCLP12524 364 aaPredicted RBP15.26■□□□□ 0.03
RBM39-212ENST00000429968 GUCY2CP25092 1073 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 GYS2P54840 703 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 GABPB1Q06547 395 aaPredicted RBP15.26■□□□□ 0.03
RBM39-212ENST00000429968 MTMR1Q13613 665 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 SMC1AQ14683 1233 aaKnown RBP15.26■□□□□ 0.03
RBM39-212ENST00000429968 RDH13Q8NBN7 331 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 CAGE1Q8TC20 777 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 NUCKS1Q9H1E3 243 aaKnown RBP15.26■□□□□ 0.03
RBM39-212ENST00000429968 GPRC5CQ9NQ84 441 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 PRDM4Q9UKN5 801 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 WDR90Q96KV7 1748 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 LRRIQ3A6PVS8 624 aaPredicted RBP15.26■□□□□ 0.03
RBM39-212ENST00000429968 POTEB2H3BUK9 544 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 N4BP1O75113 896 aaKnown RBP15.26■□□□□ 0.03
RBM39-212ENST00000429968 PALMO75781 387 aa15.26■□□□□ 0.03
RBM39-212ENST00000429968 RPL13P26373 211 aaKnown RBP15.26■□□□□ 0.03
RBM39-212ENST00000429968 RARRES1P49788 294 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms