RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 DLX2Q07687 328 aaPredicted RBP16.85■□□□□ 0.29
MSH5-208ENST00000429846 ADAM15Q13444 863 aa16.85■□□□□ 0.29
MSH5-208ENST00000429846 KIZQ2M2Z5 673 aa16.85■□□□□ 0.29
MSH5-208ENST00000429846 METTL13Q8N6R0 699 aa16.85■□□□□ 0.29
MSH5-208ENST00000429846 EFHBQ8N7U6 833 aa16.85■□□□□ 0.29
MSH5-208ENST00000429846 MAP7D2Q96T17 732 aa16.85■□□□□ 0.29
MSH5-208ENST00000429846 OSMRQ99650 979 aa16.85■□□□□ 0.29
MSH5-208ENST00000429846 C22orf23Q9BZE7 217 aa16.85■□□□□ 0.29
MSH5-208ENST00000429846 ELAC1Q9H777 363 aaKnown RBP16.85■□□□□ 0.29
MSH5-208ENST00000429846 CDHR5Q9HBB8 845 aa16.85■□□□□ 0.29
MSH5-208ENST00000429846 TMEM161AQ9NX61 479 aa16.85■□□□□ 0.29
MSH5-208ENST00000429846 GABBR1Q9UBS5 961 aa16.85■□□□□ 0.29
MSH5-208ENST00000429846 CD207Q9UJ71 328 aa16.85■□□□□ 0.29
MSH5-208ENST00000429846 ADAMTS3O15072 1205 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 GPR32O75388 356 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 CSPG5O95196 566 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 DNAJB1P25685 340 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 SFNP31947 248 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 GTF2F1P35269 517 aaKnown RBP eCLIP16.84■□□□□ 0.29
MSH5-208ENST00000429846 NDUFV1P49821 464 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 USP11P51784 963 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 JAK3P52333 1124 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 FAM228AQ86W67 206 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 RASGRP4Q8TDF6 673 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 RIT2Q99578 217 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 SLC26A6Q9BXS9 759 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 IGFLR1Q9H665 355 aa16.84■□□□□ 0.29
MSH5-208ENST00000429846 TBKBP1A7MCY6 615 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 HOXA2O43364 376 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 EYA4O95677 639 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 VTNP04004 478 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 OATP04181 439 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 PDIA3P30101 505 aaKnown RBP16.83■□□□□ 0.28
MSH5-208ENST00000429846 GATMP50440 423 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 CLCN3P51790 818 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 CLUL1Q15846 466 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 SPOUT1Q5T280 376 aaKnown RBP16.83■□□□□ 0.28
MSH5-208ENST00000429846 TRIM22Q8IYM9 498 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 FAM177A1Q8N128 213 aaPredicted RBP16.83■□□□□ 0.28
MSH5-208ENST00000429846 LINC01465Q8N7H1 131 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 MSLNLQ96KJ4 702 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 UIMC1Q96RL1 719 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 PPP1R16BQ96T49 567 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 ATP6V0A4Q9HBG4 840 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 DISC1Q9NRI5 854 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 NRBP2Q9NSY0 501 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 VPS54Q9P1Q0 977 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 AKT3Q9Y243 479 aa16.83■□□□□ 0.28
MSH5-208ENST00000429846 MSH4O15457 936 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 LINC01565O15544 149 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 GAS7O60861 476 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 LAG3P18627 525 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 IBSPP21815 317 aaPredicted RBP16.82■□□□□ 0.28
MSH5-208ENST00000429846 IRS1P35568 1242 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 FAM189BP81408 668 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 PRKCEQ02156 737 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 COASYQ13057 564 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 DSC3Q14574 896 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 PDE12Q6L8Q7 609 aaKnown RBP16.82■□□□□ 0.28
MSH5-208ENST00000429846 EFCAB12Q6NXP0 572 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 TRMT1LQ7Z2T5 733 aaKnown RBP16.82■□□□□ 0.28
MSH5-208ENST00000429846 SMRP1Q8NCR6 262 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 RDM1Q8NG50 284 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 CCDC136Q96JN2 1154 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 CDCA3Q99618 268 aaPredicted RBP16.82■□□□□ 0.28
MSH5-208ENST00000429846 TEKT3Q9BXF9 490 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 TLR9Q9NR96 1032 aa16.82■□□□□ 0.28
MSH5-208ENST00000429846 ZNF862O60290 1169 aa16.81■□□□□ 0.28
MSH5-208ENST00000429846 ZSCAN20P17040 1043 aaPredicted RBP16.81■□□□□ 0.28
MSH5-208ENST00000429846 EIF4BP23588 611 aaKnown RBP16.81■□□□□ 0.28
MSH5-208ENST00000429846 NRIP1P48552 1158 aa16.81■□□□□ 0.28
MSH5-208ENST00000429846 NLRP11P59045 1033 aaKnown RBP16.81■□□□□ 0.28
MSH5-208ENST00000429846 NLRP5P59047 1200 aa16.81■□□□□ 0.28
MSH5-208ENST00000429846 FAM102BQ5T8I3 360 aa16.81■□□□□ 0.28
MSH5-208ENST00000429846 LRCH2Q5VUJ6 765 aa16.81■□□□□ 0.28
MSH5-208ENST00000429846 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
MSH5-208ENST00000429846 ADGRD2Q7Z7M1 963 aa16.81■□□□□ 0.28
MSH5-208ENST00000429846 THNSL1Q8IYQ7 743 aa16.81■□□□□ 0.28
MSH5-208ENST00000429846 COLGALT1Q8NBJ5 622 aa16.81■□□□□ 0.28
MSH5-208ENST00000429846 SLC5A5Q92911 643 aa16.81■□□□□ 0.28
MSH5-208ENST00000429846 TMEM117Q9H0C3 514 aa16.81■□□□□ 0.28
MSH5-208ENST00000429846 LZTS1Q9Y250 596 aa16.81■□□□□ 0.28
MSH5-208ENST00000429846 FGF18O76093 207 aa16.8■□□□□ 0.28
MSH5-208ENST00000429846 DEXIO95424 95 aa16.8■□□□□ 0.28
MSH5-208ENST00000429846 HOXD11P31277 338 aaPredicted RBP16.8■□□□□ 0.28
MSH5-208ENST00000429846 PPM1AP35813 382 aa16.8■□□□□ 0.28
MSH5-208ENST00000429846 CCT2P78371 535 aaKnown RBP16.8■□□□□ 0.28
MSH5-208ENST00000429846 TBC1D8BQ0IIM8 1120 aa16.8■□□□□ 0.28
MSH5-208ENST00000429846 Q4G0T1 1027 aa16.8■□□□□ 0.28
MSH5-208ENST00000429846 LRRC43Q8N309 656 aa16.8■□□□□ 0.28
MSH5-208ENST00000429846 TBCKQ8TEA7 893 aa16.8■□□□□ 0.28
MSH5-208ENST00000429846 ADAMTS10Q9H324 1103 aa16.8■□□□□ 0.28
MSH5-208ENST00000429846 NCOA5Q9HCD5 579 aaKnown RBP16.8■□□□□ 0.28
MSH5-208ENST00000429846 TYW1Q9NV66 732 aaKnown RBP16.8■□□□□ 0.28
MSH5-208ENST00000429846 CLEC1BQ9P126 229 aa16.8■□□□□ 0.28
MSH5-208ENST00000429846 PCDHA4Q9UN74 947 aa16.8■□□□□ 0.28
MSH5-208ENST00000429846 MUC6Q6W4X9 2439 aa16.8■□□□□ 0.28
MSH5-208ENST00000429846 CPLX1O14810 134 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 EDIL3O43854 480 aa16.79■□□□□ 0.28
MSH5-208ENST00000429846 GLP2RO95838 553 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms