RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 SYMPKQ92797 1274 aaKnown RBP16.66■□□□□ 0.26
GARNL3-204ENST00000429629 WNT8BQ93098 351 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 EPSTI1Q96J88 318 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 CLIC6Q96NY7 704 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 MAP7D2Q96T17 732 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 PYM1Q9BRP8 204 aaKnown RBP16.66■□□□□ 0.26
GARNL3-204ENST00000429629 TIPINQ9BVW5 301 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 STK17AQ9UEE5 414 aa16.66■□□□□ 0.26
GARNL3-204ENST00000429629 ARHGEF35A5YM69 484 aa16.65■□□□□ 0.26
GARNL3-204ENST00000429629 H0YGN5 161 aa16.65■□□□□ 0.26
GARNL3-204ENST00000429629 CXCL10P02778 98 aa16.65■□□□□ 0.26
GARNL3-204ENST00000429629 CMA1P23946 247 aa16.65■□□□□ 0.26
GARNL3-204ENST00000429629 CYP2C18P33260 490 aa16.65■□□□□ 0.26
GARNL3-204ENST00000429629 POLGP54098 1239 aaPredicted RBP16.65■□□□□ 0.26
GARNL3-204ENST00000429629 PPIGQ13427 754 aaKnown RBP eCLIP16.65■□□□□ 0.264e-8■■□□□ 12.8
GARNL3-204ENST00000429629 MKRN4PQ13434 485 aaPredicted RBP16.65■□□□□ 0.26
GARNL3-204ENST00000429629 ZNF618Q5T7W0 954 aa16.65■□□□□ 0.26
GARNL3-204ENST00000429629 PLA2G4FQ68DD2 849 aa16.65■□□□□ 0.26
GARNL3-204ENST00000429629 CCDC73Q6ZRK6 1079 aa16.65■□□□□ 0.26
GARNL3-204ENST00000429629 CLEC17AQ6ZS10 378 aa16.65■□□□□ 0.26
GARNL3-204ENST00000429629 TRMT1LQ7Z2T5 733 aaKnown RBP16.65■□□□□ 0.26
GARNL3-204ENST00000429629 METTL13Q8N6R0 699 aa16.65■□□□□ 0.26
GARNL3-204ENST00000429629 CCDC43Q96MW1 224 aaKnown RBP16.65■□□□□ 0.26
GARNL3-204ENST00000429629 GDF15Q99988 308 aa16.65■□□□□ 0.26
GARNL3-204ENST00000429629 WNT8AQ9H1J5 351 aa16.65■□□□□ 0.26
GARNL3-204ENST00000429629 ZMYND8Q9ULU4 1186 aaPredicted RBP16.65■□□□□ 0.26
GARNL3-204ENST00000429629 FAM237AA0A1B0GTK4 181 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 A0A1W2PQ27 194 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 A0A1W2PQ64 194 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 A0A1W2PQD8 194 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 TMEM150BA6NC51 233 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 M0QZ92 97 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 CRYBB1P53674 252 aaPredicted RBP16.64■□□□□ 0.25
GARNL3-204ENST00000429629 MRPS6P82932 125 aaKnown RBP16.64■□□□□ 0.25
GARNL3-204ENST00000429629 MGAT3Q09327 533 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 MXD4Q14582 209 aaPredicted RBP16.64■□□□□ 0.25
GARNL3-204ENST00000429629 CSPP1Q1MSJ5 1256 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 SHC4Q6S5L8 630 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 PADI6Q6TGC4 694 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 USP49Q70CQ1 688 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 BADQ92934 168 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 CELF4Q9BZC1 486 aaKnown RBP16.64■□□□□ 0.25
GARNL3-204ENST00000429629 PPP1R12CQ9BZL4 782 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 BHMT2Q9H2M3 363 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 CUEDC2Q9H467 287 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 SUGCTQ9HAC7 445 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 ATP6V0A4Q9HBG4 840 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 KCNG1Q9UIX4 513 aa16.64■□□□□ 0.25
GARNL3-204ENST00000429629 GPR32O75388 356 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 CHRNA1P02708 482 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 SYN1P17600 705 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
GARNL3-204ENST00000429629 GUCY2CP25092 1073 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 ARL2P36404 184 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 FPGSQ05932 587 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 GPNMBQ14956 572 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 EMC2Q15006 297 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 KARSQ15046 597 aaKnown RBP16.63■□□□□ 0.25
GARNL3-204ENST00000429629 ODR4Q5SWX8 454 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 RRAGBQ5VZM2 374 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 RESP18Q5W5W9 173 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 KCNK18Q7Z418 384 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 ZNF410Q86VK4 478 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 PSPC1Q8WXF1 523 aaKnown RBP16.63■□□□□ 0.25
GARNL3-204ENST00000429629 MTRQ99707 1265 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 IL23AQ9NPF7 189 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 XPNPEP1Q9NQW7 623 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 BLOC1S4Q9NUP1 217 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 FAM13BQ9NYF5 915 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 SUCLA2Q9P2R7 463 aaPredicted RBP16.63■□□□□ 0.25
GARNL3-204ENST00000429629 TRPV2Q9Y5S1 764 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 UMODL1Q5DID0 1318 aa16.63■□□□□ 0.25
GARNL3-204ENST00000429629 E9PMD0 336 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 PLA2G4BP0C869 781 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 PLCG1P19174 1290 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 MAGEA10P43363 369 aaPredicted RBP16.62■□□□□ 0.25
GARNL3-204ENST00000429629 CLCN3P51790 818 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 SLC12A3P55017 1021 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 CCL23P55773 120 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 SPECC1Q5M775 1068 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 RINT1Q6NUQ1 792 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 C1orf186Q6ZWK4 172 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 LRRC71Q8N4P6 559 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 IQUBQ8NA54 791 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 KIFAP3Q92845 792 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 SH2D3AQ9BRG2 576 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 FAM49AQ9H0Q0 323 aaPredicted RBP16.62■□□□□ 0.25
GARNL3-204ENST00000429629 ADAMTS10Q9H324 1103 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 C17orf75Q9HAS0 396 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 DOCK5Q9H7D0 1870 aa16.62■□□□□ 0.25
GARNL3-204ENST00000429629 CSF2RAP15509 400 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 GPC3P51654 580 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 MBTPS1Q14703 1052 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 PCBP1Q15365 356 aaKnown RBP eCLIP16.61■□□□□ 0.25
GARNL3-204ENST00000429629 PRPF38BQ5VTL8 546 aaKnown RBP16.61■□□□□ 0.25
GARNL3-204ENST00000429629 IFNLR1Q8IU57 520 aaPredicted RBP16.61■□□□□ 0.25
GARNL3-204ENST00000429629 RASSF8Q8NHQ8 419 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 PRPF31Q8WWY3 499 aaKnown RBP16.61■□□□□ 0.25
GARNL3-204ENST00000429629 RAD54LQ92698 747 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 APBB2Q92870 758 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms