RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 FAF2Q96CS3 445 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 NRBP1Q9UHY1 535 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 DNAJC12Q9UKB3 198 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 ARPP19P56211 112 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 ALX1Q15699 326 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 Q3C1V9 767 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 RNF219Q5W0B1 726 aaPredicted RBP13.69□□□□□ -0.22
LDB3-205ENST00000429277 GRAMD1CQ8IYS0 662 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 CFAP36Q96G28 342 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 TRAIPQ9BWF2 469 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 CYP2E1P05181 493 aaPredicted RBP13.69□□□□□ -0.22
LDB3-205ENST00000429277 OCRLQ01968 901 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 RCSD1Q6JBY9 416 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 ELMOD1Q8N336 334 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 NGRNQ9NPE2 291 aaKnown RBP13.69□□□□□ -0.22
LDB3-205ENST00000429277 NOVA2Q9UNW9 492 aaKnown RBP13.69□□□□□ -0.22
LDB3-205ENST00000429277 TMCC1O94876 653 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 KIAA1755Q5JYT7 1200 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 TRIM55Q9BYV6 548 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 GINM1Q9NU53 330 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 USP17L5A8MUK1 530 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 SASH1O94885 1247 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 HSPA4LO95757 839 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 SUSD4Q5VX71 490 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 C1orf228Q6PIY5 440 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 C2orf69Q8N8R5 385 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 PIGBQ92521 554 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 SPTLC3Q9NUV7 552 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 PIM2Q9P1W9 311 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 CNOT8Q9UFF9 292 aaKnown RBP13.69□□□□□ -0.22
LDB3-205ENST00000429277 ADAMTS1Q9UHI8 967 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 HPCAL4Q9UM19 191 aa13.69□□□□□ -0.22
LDB3-205ENST00000429277 COPEO14579 308 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 KIAA0391O15091 583 aaKnown RBP13.68□□□□□ -0.22
LDB3-205ENST00000429277 ARHGDIAP52565 204 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 RMDN3Q96TC7 470 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 PARD6BQ9BYG5 372 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 TRIM45Q9H8W5 580 aaPredicted RBP13.68□□□□□ -0.22
LDB3-205ENST00000429277 NARFQ9UHQ1 456 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 FGGP02679 453 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 NR3C1P04150 777 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 KRT7P08729 469 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 ZNF18P17022 549 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 CRKP46108 304 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 ZNF699Q32M78 642 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 APOBEC3FQ8IUX4 373 aaKnown RBP13.68□□□□□ -0.22
LDB3-205ENST00000429277 RAD54LQ92698 747 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 UTYO14607 1347 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 ZNF521Q96K83 1311 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 GH2P01242 217 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 OSTNP61366 133 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 TAP1Q03518 808 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 PFASO15067 1338 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 P4HBP07237 508 aaKnown RBP13.68□□□□□ -0.22
LDB3-205ENST00000429277 SMARCA1P28370 1054 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 YWHAHQ04917 246 aaPredicted RBP13.68□□□□□ -0.22
LDB3-205ENST00000429277 DRP2Q13474 957 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 KRT33BQ14525 404 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 PADI6Q6TGC4 694 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 TEX12Q9BXU0 123 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 TRPV6Q9H1D0 765 aa13.68□□□□□ -0.22
LDB3-205ENST00000429277 RRP15Q9Y3B9 282 aaKnown RBP13.68□□□□□ -0.22
LDB3-205ENST00000429277 GRID2IPA4D2P6 1211 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 DDX5P17844 614 aaKnown RBP13.67□□□□□ -0.22
LDB3-205ENST00000429277 MDM2Q00987 491 aaPredicted RBP13.67□□□□□ -0.22
LDB3-205ENST00000429277 CASP8Q14790 479 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 ITPRIPL1Q6GPH6 555 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 SCARA5Q6ZMJ2 495 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 URGCPQ8TCY9 931 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 KRT82Q9NSB4 513 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 KLHL8Q9P2G9 620 aaPredicted RBP13.67□□□□□ -0.22
LDB3-205ENST00000429277 ANAPC7Q9UJX3 599 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 ACAD11Q709F0 780 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 DDX56Q9NY93 547 aaKnown RBP13.67□□□□□ -0.22
LDB3-205ENST00000429277 TRIM33Q9UPN9 1127 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 SUGT1Q9Y2Z0 365 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 GOLGA8MH3BSY2 632 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 FOXP2O15409 715 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 NCF2P19878 526 aaPredicted RBP13.67□□□□□ -0.22
LDB3-205ENST00000429277 SLC12A1Q13621 1099 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 TTLL4Q14679 1199 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 SLC10A5Q5PT55 438 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 SYT2Q8N9I0 419 aaPredicted RBP13.67□□□□□ -0.22
LDB3-205ENST00000429277 MTRQ99707 1265 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 EDEM3Q9BZQ6 932 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 TMEM60Q9H2L4 133 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 MRPL46Q9H2W6 279 aaKnown RBP13.67□□□□□ -0.22
LDB3-205ENST00000429277 XAB2Q9HCS7 855 aaKnown RBP13.67□□□□□ -0.22
LDB3-205ENST00000429277 ARAP3Q8WWN8 1544 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 GGPS1O95749 300 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 SLC4A1P02730 911 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 HOXA13P31271 388 aaPredicted RBP13.67□□□□□ -0.22
LDB3-205ENST00000429277 GPC3P51654 580 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 TAF11Q15544 211 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 NAALADL2Q58DX5 795 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 KCNV1Q6PIU1 500 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 FRA10AC1Q70Z53 315 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 TIPINQ9BVW5 301 aa13.67□□□□□ -0.22
LDB3-205ENST00000429277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms