RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 IGKV6-21A0A0C4DH24 114 aa24.89■■□□□ 1.58
PTPN18-205ENST00000428843 SLC26A4O43511 780 aa24.89■■□□□ 1.58
PTPN18-205ENST00000428843 RPLP2P05387 115 aaKnown RBP24.89■■□□□ 1.58
PTPN18-205ENST00000428843 CSF2RAP15509 400 aa24.89■■□□□ 1.58
PTPN18-205ENST00000428843 RFC5P40937 340 aa24.89■■□□□ 1.58
PTPN18-205ENST00000428843 POLGP54098 1239 aaPredicted RBP24.89■■□□□ 1.58
PTPN18-205ENST00000428843 TMEM119Q4V9L6 283 aa24.89■■□□□ 1.58
PTPN18-205ENST00000428843 KCNK18Q7Z418 384 aa24.89■■□□□ 1.58
PTPN18-205ENST00000428843 LEO1Q8WVC0 666 aaPredicted RBP24.89■■□□□ 1.58
PTPN18-205ENST00000428843 SYMPKQ92797 1274 aaKnown RBP24.89■■□□□ 1.58
PTPN18-205ENST00000428843 CDK5RAP3Q96JB5 506 aa24.89■■□□□ 1.58
PTPN18-205ENST00000428843 CCSER1Q9C0I3 900 aa24.89■■□□□ 1.58
PTPN18-205ENST00000428843 NT5C3AQ9H0P0 336 aa24.89■■□□□ 1.58
PTPN18-205ENST00000428843 BMP2KQ9NSY1 1161 aaPredicted RBP24.89■■□□□ 1.58
PTPN18-205ENST00000428843 CHMP5Q9NZZ3 219 aa24.89■■□□□ 1.58
PTPN18-205ENST00000428843 SIP14410 1827 aa24.89■■□□□ 1.57
PTPN18-205ENST00000428843 RSPH10B2B2RC85 870 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 E9PMD0 336 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 CUTAO60888 179 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 RSPH10BP0C881 870 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 TMOD1P28289 359 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 FPGSQ05932 587 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 MGAT3Q09327 533 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 TMEM62Q0P6H9 643 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 FAM26DQ5JW98 314 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 EXOC8Q8IYI6 725 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 NME8Q8N427 588 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 SLC7A3Q8WY07 619 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 CALML4Q96GE6 196 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 SPATA32Q96LK8 384 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 JPH2Q9BR39 696 aaPredicted RBP24.88■■□□□ 1.57
PTPN18-205ENST00000428843 PCDHA7Q9UN72 937 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 DNM3Q9UQ16 869 aa24.88■■□□□ 1.57
PTPN18-205ENST00000428843 ARHGEF35A5YM69 484 aa24.87■■□□□ 1.57
PTPN18-205ENST00000428843 EYA4O95677 639 aa24.87■■□□□ 1.57
PTPN18-205ENST00000428843 CHRNA1P02708 482 aa24.87■■□□□ 1.57
PTPN18-205ENST00000428843 ME1P48163 572 aa24.87■■□□□ 1.57
PTPN18-205ENST00000428843 MRPS6P82932 125 aaKnown RBP24.87■■□□□ 1.57
PTPN18-205ENST00000428843 MKRN4PQ13434 485 aaPredicted RBP24.87■■□□□ 1.57
PTPN18-205ENST00000428843 DRP2Q13474 957 aa24.87■■□□□ 1.57
PTPN18-205ENST00000428843 EMC2Q15006 297 aa24.87■■□□□ 1.57
PTPN18-205ENST00000428843 KARSQ15046 597 aaKnown RBP24.87■■□□□ 1.57
PTPN18-205ENST00000428843 BHMT2Q9H2M3 363 aa24.87■■□□□ 1.57
PTPN18-205ENST00000428843 AKT3Q9Y243 479 aa24.87■■□□□ 1.57
PTPN18-205ENST00000428843 CDY2AQ9Y6F7 541 aa24.87■■□□□ 1.57
PTPN18-205ENST00000428843 USO1O60763 962 aaKnown RBP24.86■■□□□ 1.57
PTPN18-205ENST00000428843 DGAT1O75907 488 aa24.86■■□□□ 1.57
PTPN18-205ENST00000428843 VTNP04004 478 aa24.86■■□□□ 1.57
PTPN18-205ENST00000428843 PPIGQ13427 754 aaKnown RBP eCLIP24.86■■□□□ 1.572e-7■■■■□ 21.8
PTPN18-205ENST00000428843 GPNMBQ14956 572 aa24.86■■□□□ 1.57
PTPN18-205ENST00000428843 AXDND1Q5T1B0 1012 aaPredicted RBP24.86■■□□□ 1.57
PTPN18-205ENST00000428843 IER5Q5VY09 327 aa24.86■■□□□ 1.57
PTPN18-205ENST00000428843 KCTD17Q8N5Z5 321 aa24.86■■□□□ 1.57
PTPN18-205ENST00000428843 RASSF8Q8NHQ8 419 aa24.86■■□□□ 1.57
PTPN18-205ENST00000428843 MAP7D2Q96T17 732 aa24.86■■□□□ 1.57
PTPN18-205ENST00000428843 MTRQ99707 1265 aa24.86■■□□□ 1.57
PTPN18-205ENST00000428843 GDF15Q99988 308 aa24.86■■□□□ 1.57
PTPN18-205ENST00000428843 SCAND2PQ9GZW5 306 aaPredicted RBP24.86■■□□□ 1.57
PTPN18-205ENST00000428843 M0QZ92 97 aa24.85■■□□□ 1.57
PTPN18-205ENST00000428843 GAS2O43903 313 aaKnown RBP24.85■■□□□ 1.57
PTPN18-205ENST00000428843 PARNO95453 639 aaKnown RBP24.85■■□□□ 1.57
PTPN18-205ENST00000428843 PLCG1P19174 1290 aa24.85■■□□□ 1.57
PTPN18-205ENST00000428843 RFC2P35250 354 aa24.85■■□□□ 1.57
PTPN18-205ENST00000428843 TXLNAP40222 546 aa24.85■■□□□ 1.57
PTPN18-205ENST00000428843 DNM2P50570 870 aa24.85■■□□□ 1.57
PTPN18-205ENST00000428843 MBTPS1Q14703 1052 aa24.85■■□□□ 1.57
PTPN18-205ENST00000428843 DEFB128Q7Z7B8 93 aa24.85■■□□□ 1.57
PTPN18-205ENST00000428843 TMEM143Q96AN5 459 aa24.85■■□□□ 1.57
PTPN18-205ENST00000428843 PPP1R16BQ96T49 567 aa24.85■■□□□ 1.57
PTPN18-205ENST00000428843 ATP6V0A4Q9HBG4 840 aa24.85■■□□□ 1.57
PTPN18-205ENST00000428843 XPNPEP1Q9NQW7 623 aa24.85■■□□□ 1.57
PTPN18-205ENST00000428843 TRPV2Q9Y5S1 764 aa24.85■■□□□ 1.57
PTPN18-205ENST00000428843 CEP290O15078 2479 aa24.84■■□□□ 1.57
PTPN18-205ENST00000428843 RBAK-RBAKDNI3L0D1 243 aa24.84■■□□□ 1.57
PTPN18-205ENST00000428843 NBNO60934 754 aa24.84■■□□□ 1.57
PTPN18-205ENST00000428843 EPHB4P54760 987 aa24.84■■□□□ 1.57
PTPN18-205ENST00000428843 PRPF38BQ5VTL8 546 aaKnown RBP24.84■■□□□ 1.57
PTPN18-205ENST00000428843 SHC4Q6S5L8 630 aa24.84■■□□□ 1.57
PTPN18-205ENST00000428843 PADI6Q6TGC4 694 aa24.84■■□□□ 1.57
PTPN18-205ENST00000428843 LRRC15Q8TF66 581 aa24.84■■□□□ 1.57
PTPN18-205ENST00000428843 VWCEQ96DN2 955 aa24.84■■□□□ 1.57
PTPN18-205ENST00000428843 CELF4Q9BZC1 486 aaKnown RBP24.84■■□□□ 1.57
PTPN18-205ENST00000428843 OSBPL7Q9BZF2 842 aa24.84■■□□□ 1.57
PTPN18-205ENST00000428843 GDPD2Q9HCC8 539 aa24.84■■□□□ 1.57
PTPN18-205ENST00000428843 IL23AQ9NPF7 189 aa24.84■■□□□ 1.57
PTPN18-205ENST00000428843 SUCLA2Q9P2R7 463 aaPredicted RBP24.84■■□□□ 1.57
PTPN18-205ENST00000428843 ACRP10323 421 aa24.83■■□□□ 1.57
PTPN18-205ENST00000428843 KIZQ2M2Z5 673 aa24.83■■□□□ 1.57
PTPN18-205ENST00000428843 TCP11Q8WWU5 503 aa24.83■■□□□ 1.57
PTPN18-205ENST00000428843 CDHR5Q9HBB8 845 aa24.83■■□□□ 1.57
PTPN18-205ENST00000428843 CCDC39Q9UFE4 941 aa24.83■■□□□ 1.57
PTPN18-205ENST00000428843 TET1Q8NFU7 2136 aa24.83■■□□□ 1.57
PTPN18-205ENST00000428843 GPR32O75388 356 aa24.82■■□□□ 1.56
PTPN18-205ENST00000428843 NLRP11P59045 1033 aaKnown RBP24.82■■□□□ 1.56
PTPN18-205ENST00000428843 C16orf59Q7L2K0 433 aa24.82■■□□□ 1.56
PTPN18-205ENST00000428843 RPUSD2Q8IZ73 545 aaKnown RBP24.82■■□□□ 1.56
PTPN18-205ENST00000428843 PSPC1Q8WXF1 523 aaKnown RBP24.82■■□□□ 1.56
PTPN18-205ENST00000428843 ZNF668Q96K58 619 aaPredicted RBP24.82■■□□□ 1.56
PTPN18-205ENST00000428843 UBE2OQ9C0C9 1292 aaKnown RBP24.82■■□□□ 1.56
PTPN18-205ENST00000428843 BLOC1S4Q9NUP1 217 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms