RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
CECR3-201ENST00000428828 TAX1BP1Q86VP1 789 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 ARMC2Q8NEN0 867 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 RAET1EQ8TD07 263 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 ZNF577Q9BSK1 485 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 JADE2Q9NQC1 790 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 TUBE1Q9UJT0 475 aa12.53□□□□□ -0.4
CECR3-201ENST00000428828 MYH9P35579 1960 aaKnown RBP12.53□□□□□ -0.4
CECR3-201ENST00000428828 CTAGE9A4FU28 777 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 SNAI1O95863 264 aaPredicted RBP12.52□□□□□ -0.4
CECR3-201ENST00000428828 BMP15O95972 392 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 SERPINC1P01008 464 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 GRIN1Q05586 938 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 TBC1D8BQ0IIM8 1120 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 ORC2Q13416 577 aaPredicted RBP12.52□□□□□ -0.4
CECR3-201ENST00000428828 PRAMEF19Q5SWL8 479 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 OTUD6BQ8N6M0 293 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 C4orf32Q8N8J7 132 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 MAB21L3Q8N8X9 362 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 ETNPPLQ8TBG4 499 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 BCAS4Q8TDM0 211 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 KCNG4Q8TDN1 519 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 TRIB2Q92519 343 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 RUBCNQ92622 972 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 RPGRIP1Q96KN7 1286 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 MBOAT7Q96N66 472 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 INPP4AQ96PE3 977 aaPredicted RBP12.52□□□□□ -0.4
CECR3-201ENST00000428828 PANX2Q96RD6 677 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 CAPS2Q9BXY5 557 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 SUGCTQ9HAC7 445 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 ATP6V0A4Q9HBG4 840 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 PDGFCQ9NRA1 345 aa12.52□□□□□ -0.4
CECR3-201ENST00000428828 GOLGA8KD6RF30 607 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 STAM2O75886 525 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 TECP42680 631 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 RWDD2BP57060 319 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 SEMA3FQ13275 785 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 ARHGEF6Q15052 776 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 SPECC1Q5M775 1068 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 MAMDC4Q6UXC1 1216 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 TC2NQ8N9U0 490 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 MORC4Q8TE76 937 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 HAS1Q92839 578 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 GPRASP2Q96D09 838 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 AGO4Q9HCK5 861 aaKnown RBP12.52□□□□□ -0.41
CECR3-201ENST00000428828 KCNMB3Q9NPA1 279 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 KLC4Q9NSK0 619 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 SPATS2LQ9NUQ6 558 aaKnown RBP12.52□□□□□ -0.41
CECR3-201ENST00000428828 ETAA1Q9NY74 926 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 GRIN2DO15399 1336 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 SYNGAP1Q96PV0 1343 aa12.52□□□□□ -0.41
CECR3-201ENST00000428828 FRMPD3Q5JV73 1810 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 IPO5O00410 1097 aaKnown RBP12.51□□□□□ -0.41
CECR3-201ENST00000428828 LAD1O00515 517 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 CHMP2AO43633 222 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 ATP9AO75110 1047 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 PHACTR2O75167 634 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 HSPA8P11142 646 aaKnown RBP12.51□□□□□ -0.41
CECR3-201ENST00000428828 EPB41P11171 864 aaKnown RBP12.51□□□□□ -0.41
CECR3-201ENST00000428828 NEFHP12036 1026 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 LBX1P52954 281 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 SP4Q02446 784 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 STIM1Q13586 685 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 IL17AQ16552 155 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 AP1ARQ63HQ0 302 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 OLFML2BQ68BL8 750 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 NAIF1Q69YI7 327 aaPredicted RBP12.51□□□□□ -0.41
CECR3-201ENST00000428828 TLDC1Q6P9B6 456 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 TOGARAM2Q6ZUX3 1019 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 OTOP1Q7RTM1 612 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 NIPA1Q7RTP0 329 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 ZNF483Q8TF39 744 aaPredicted RBP12.51□□□□□ -0.41
CECR3-201ENST00000428828 MTMR9Q96QG7 549 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 PLEKHA4Q9H4M7 779 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 HOMER3Q9NSC5 361 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 FBXO2Q9UK22 296 aaPredicted RBP12.51□□□□□ -0.41
CECR3-201ENST00000428828 PCDHA7Q9UN72 937 aa12.51□□□□□ -0.41
CECR3-201ENST00000428828 POTEMA6NI47 508 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 ADCY3O60266 1144 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 GAS7O60861 476 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 PPP6R2O75170 966 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 ARIH2O95376 493 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 GNRH1P01148 92 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 XRCC5P13010 732 aaKnown RBP12.5□□□□□ -0.41
CECR3-201ENST00000428828 ADCYAP1R1P41586 468 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 SP2Q02086 613 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 TRIM32Q13049 653 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 ITGB3BPQ13352 177 aaPredicted RBP12.5□□□□□ -0.41
CECR3-201ENST00000428828 ACVR2BQ13705 512 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 LY6KQ17RY6 165 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 TMEM266Q2M3C6 531 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 TMEM63BQ5T3F8 832 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 EMC10Q5UCC4 262 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 SPECC1LQ69YQ0 1117 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 DTHD1Q6ZMT9 781 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 SLFN12Q8IYM2 578 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 KRI1Q8N9T8 703 aaKnown RBP12.5□□□□□ -0.41
CECR3-201ENST00000428828 TCP11Q8WWU5 503 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 PLCD4Q9BRC7 762 aa12.5□□□□□ -0.41
CECR3-201ENST00000428828 ABHD16BQ9H3Z7 469 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms