RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 TAAR1Q96RJ0 339 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 CTAGE1Q96RT6 745 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 MAP3K14Q99558 947 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 HINFPQ9BQA5 517 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 SPZ1Q9BXG8 430 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 AMNQ9BXJ7 453 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 PANK2Q9BZ23 570 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 MAF1Q9H063 256 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 RBSNQ9H1K0 784 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 CHD6Q8TD26 2715 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 DOCK5Q9H7D0 1870 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 SCN10AQ9Y5Y9 1956 aa9.84□□□□□ -0.83
HDAC1-202ENST00000428704 A6NJR5 290 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 NKRFO15226 690 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDAC1-202ENST00000428704 FIBPO43427 364 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 CDKL5O76039 1030 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 CCT2P78371 535 aaKnown RBP9.83□□□□□ -0.84
HDAC1-202ENST00000428704 COASYQ13057 564 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 CPLX2Q6PUV4 134 aaKnown RBP9.83□□□□□ -0.84
HDAC1-202ENST00000428704 RAB11FIP4Q86YS3 637 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 FIBCD1Q8N539 461 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 DBF4BQ8NFT6 615 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 FBXO18Q8NFZ0 1043 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 LEO1Q8WVC0 666 aaPredicted RBP9.83□□□□□ -0.84
HDAC1-202ENST00000428704 COL26A1Q96A83 441 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 ZNF396Q96N95 335 aaPredicted RBP9.83□□□□□ -0.84
HDAC1-202ENST00000428704 IFIH1Q9BYX4 1025 aaKnown RBP9.83□□□□□ -0.84
HDAC1-202ENST00000428704 TSPY26PQ9H489 355 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 CLEC1BQ9P126 229 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 MRPL11Q9Y3B7 192 aaKnown RBP9.83□□□□□ -0.84
HDAC1-202ENST00000428704 PCDHGC5Q9Y5F6 944 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 MYH7BA7E2Y1 1941 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 ZNF292O60281 2723 aa9.83□□□□□ -0.84
HDAC1-202ENST00000428704 EMSYQ7Z589 1322 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 WDR87Q6ZQQ6 2873 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 C5orf67F2Z3F1 127 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 ARIH2O95376 493 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 CFBP00751 764 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 LMNAP02545 664 aaKnown RBP9.82□□□□□ -0.84
HDAC1-202ENST00000428704 MMP1P03956 469 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 PRKCSHP14314 528 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-202ENST00000428704 BMPR1AP36894 532 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 PDE4DQ08499 809 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 MBTPS1Q14703 1052 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 NTRK3Q16288 839 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 FOXD4L6Q3SYB3 417 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-202ENST00000428704 HS1BP3Q53T59 392 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 ZNF618Q5T7W0 954 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 APOA5Q6Q788 366 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 FOXD4L3Q6VB84 417 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-202ENST00000428704 FERMT3Q86UX7 667 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 SESTD1Q86VW0 696 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 MCF2L2Q86YR7 1114 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 CMTR1Q8N1G2 835 aaKnown RBP9.82□□□□□ -0.84
HDAC1-202ENST00000428704 SRBD1Q8N5C6 995 aaKnown RBP9.82□□□□□ -0.84
HDAC1-202ENST00000428704 EFHBQ8N7U6 833 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 C7orf31Q8N865 590 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 COPS5Q92905 334 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 TOP1MTQ969P6 601 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 PDLIM2Q96JY6 352 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 SPATA32Q96LK8 384 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 FUCA2Q9BTY2 467 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 MFSD1Q9H3U5 465 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 NCOA5Q9HCD5 579 aaKnown RBP9.82□□□□□ -0.84
HDAC1-202ENST00000428704 DLL3Q9NYJ7 618 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 TSR3Q9UJK0 312 aaKnown RBP9.82□□□□□ -0.84
HDAC1-202ENST00000428704 BARX2Q9UMQ3 279 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-202ENST00000428704 RWDD3Q9Y3V2 267 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 PCDHA1Q9Y5I3 950 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 EP300Q09472 2414 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-202ENST00000428704 STK36Q9NRP7 1315 aa9.82□□□□□ -0.84
HDAC1-202ENST00000428704 PNMA6FA0A0J9YX94 578 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 CCDC69A6NI79 296 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 GOLGA8BA8MQT2 603 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 CPLX1O14810 134 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 EIF2AK2P19525 551 aaKnown RBP9.81□□□□□ -0.84
HDAC1-202ENST00000428704 SMARCA1P28370 1054 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 HOXA13P31271 388 aaPredicted RBP9.81□□□□□ -0.84
HDAC1-202ENST00000428704 CLCN1P35523 988 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 PTK7Q13308 1070 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 MTMR3Q13615 1198 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 ACAP1Q15027 740 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 CCDC62Q6P9F0 684 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 TRAF7Q6Q0C0 670 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 NFXL1Q6ZNB6 911 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 RBM43Q6ZSC3 357 aaKnown RBP9.81□□□□□ -0.84
HDAC1-202ENST00000428704 TMTC3Q6ZXV5 915 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 BRAPQ7Z569 592 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 KREMEN2Q8NCW0 462 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 IL31RAQ8NI17 732 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 CTCFLQ8NI51 663 aaPredicted RBP9.81□□□□□ -0.84
HDAC1-202ENST00000428704 PIBF1Q8WXW3 757 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 RMDN3Q96TC7 470 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 TMUB1Q9BVT8 246 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 PXMP2Q9NR77 195 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 DDX19AQ9NUU7 478 aaKnown RBP9.81□□□□□ -0.84
HDAC1-202ENST00000428704 ORC3Q9UBD5 711 aaPredicted RBP9.81□□□□□ -0.84
HDAC1-202ENST00000428704 GTF2IRD1Q9UHL9 959 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 TCHHQ07283 1943 aa9.81□□□□□ -0.84
HDAC1-202ENST00000428704 FRMPD4Q14CM0 1322 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms