RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 MAFGO15525 162 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 TLR2O60603 784 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 LYPLA2O95372 231 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 KCNA2P16389 499 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 PSMC2P35998 433 aaKnown RBP11.41□□□□□ -0.58
HDAC9-210ENST00000428307 IREB2P48200 963 aaKnown RBP11.41□□□□□ -0.58
HDAC9-210ENST00000428307 KIF11P52732 1056 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 EXOC3L4Q17RC7 722 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 FAM102BQ5T8I3 360 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 DPY19L2Q6NUT2 758 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 SWSAP1Q6NVH7 229 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 ANO5Q75V66 913 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 FAM186BQ8IYM0 893 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 UBXN4Q92575 508 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 PAGR1Q9BTK6 254 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 METTL14Q9HCE5 456 aaKnown RBP11.41□□□□□ -0.58
HDAC9-210ENST00000428307 GABBR1Q9UBS5 961 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 POLR2AP24928 1970 aaKnown RBP11.41□□□□□ -0.58
HDAC9-210ENST00000428307 KRT86O43790 486 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 PEX3P56589 373 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 SOX10P56693 466 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 PPP2R3AQ06190 1150 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 GFPT1Q06210 699 aaPredicted RBP11.41□□□□□ -0.58
HDAC9-210ENST00000428307 RAPGEF1Q13905 1077 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 SFMBT2Q5VUG0 894 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 LBX2Q6XYB7 198 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 IFIH1Q9BYX4 1025 aaKnown RBP11.41□□□□□ -0.58
HDAC9-210ENST00000428307 EDEM3Q9BZQ6 932 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 PCIF1Q9H4Z3 704 aa11.41□□□□□ -0.58
HDAC9-210ENST00000428307 SLC16A4O15374 487 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 SLC16A3O15427 465 aaKnown RBP11.4□□□□□ -0.58
HDAC9-210ENST00000428307 ZNF862O60290 1169 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 EXOC3O60645 756 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 PLS3P13797 630 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 PON1P27169 355 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 SP2Q02086 613 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 KIF5AQ12840 1032 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 HGSNATQ68CP4 663 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 ZNF746Q6NUN9 644 aaPredicted RBP11.4□□□□□ -0.58
HDAC9-210ENST00000428307 NCAPG2Q86XI2 1143 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 FAM133AQ8N9E0 248 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 BORCS6Q96GS4 357 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 NAPGQ99747 312 aaPredicted RBP11.4□□□□□ -0.58
HDAC9-210ENST00000428307 EPC1Q9H2F5 836 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 R3HDMLQ9H3Y0 253 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 JPH1Q9HDC5 661 aaPredicted RBP11.4□□□□□ -0.58
HDAC9-210ENST00000428307 FRMD4BQ9Y2L6 1034 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 PCDHA13Q9Y5I0 950 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 RRP9O43818 475 aaKnown RBP11.4□□□□□ -0.58
HDAC9-210ENST00000428307 PPP1R37O75864 691 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 IRX3P78415 501 aaPredicted RBP11.4□□□□□ -0.58
HDAC9-210ENST00000428307 SLC9C1Q4G0N8 1177 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 EAPPQ56P03 285 aaPredicted RBP11.4□□□□□ -0.58
HDAC9-210ENST00000428307 SEPT14Q6ZU15 432 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 HAUS6Q7Z4H7 955 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 ANKRD13CQ8N6S4 541 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 CDCA5Q96FF9 252 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 CEP170P1Q96L14 293 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 KIFC3Q9BVG8 833 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 STRA6Q9BX79 667 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 GANQ9H2C0 597 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 PDCL3Q9H2J4 239 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 MYO1AQ9UBC5 1043 aa11.4□□□□□ -0.58
HDAC9-210ENST00000428307 PUF60Q9UHX1 559 aaKnown RBP11.4□□□□□ -0.58
HDAC9-210ENST00000428307 MYPNQ86TC9 1320 aa11.4□□□□□ -0.59
HDAC9-210ENST00000428307 CCDC169A6NNP5 214 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 TADA3O75528 432 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 TRIM49P0CI25 452 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 TRIM49CP0CI26 452 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 UCHL3P15374 230 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 EPHX2P34913 555 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 VAV2P52735 878 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 ACTR2P61160 394 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 STXBP2Q15833 593 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 GNPTABQ3T906 1256 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 GJB7Q6PEY0 223 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 GBP6Q6ZN66 633 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 CYFIP1Q7L576 1253 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 CCDC60Q8IWA6 550 aaPredicted RBP11.39□□□□□ -0.59
HDAC9-210ENST00000428307 ANKRD13AQ8IZ07 590 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 CHST13Q8NET6 341 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 SPAG5Q96R06 1193 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 GCNT4Q9P109 453 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 HDAC6Q9UBN7 1215 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 SLC9A2Q9UBY0 812 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 CDC23Q9UJX2 597 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 EFCAB8A8MWE9 144 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 SPATA31C2B4DYI2 1134 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 NF2P35240 595 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 MAGEA1P43355 309 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 PPATQ06203 517 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 KLHDC7AQ5VTJ3 777 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 EEPD1Q7L9B9 569 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 MTERF4Q7Z6M4 381 aaKnown RBP11.39□□□□□ -0.59
HDAC9-210ENST00000428307 ERO1BQ86YB8 467 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 CDHR1Q96JP9 859 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 DRC1Q96MC2 740 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 MAP7D2Q96T17 732 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 CBWD1Q9BRT8 395 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms