RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 FAM189BP81408 668 aa16.54■□□□□ 0.24
PDE6D-203ENST00000428104 SLC39A11Q8N1S5 342 aa16.54■□□□□ 0.24
PDE6D-203ENST00000428104 LRRC43Q8N309 656 aa16.54■□□□□ 0.24
PDE6D-203ENST00000428104 PCYT2Q99447 389 aa16.54■□□□□ 0.24
PDE6D-203ENST00000428104 CHMP4BQ9H444 224 aaKnown RBP16.54■□□□□ 0.24
PDE6D-203ENST00000428104 MAD2L2Q9UI95 211 aa16.54■□□□□ 0.24
PDE6D-203ENST00000428104 FRYQ5TBA9 3013 aa16.53■□□□□ 0.24
PDE6D-203ENST00000428104 SMIM35A0A1B0GVV1 85 aa16.53■□□□□ 0.24
PDE6D-203ENST00000428104 PLCB4Q15147 1175 aa16.53■□□□□ 0.24
PDE6D-203ENST00000428104 MCMDC2Q4G0Z9 681 aa16.53■□□□□ 0.24
PDE6D-203ENST00000428104 PCNX4Q63HM2 1172 aa16.53■□□□□ 0.24
PDE6D-203ENST00000428104 GPR149Q86SP6 731 aa16.53■□□□□ 0.24
PDE6D-203ENST00000428104 NLRX1Q86UT6 975 aa16.53■□□□□ 0.24
PDE6D-203ENST00000428104 CABP7Q86V35 215 aa16.53■□□□□ 0.24
PDE6D-203ENST00000428104 MAML2Q8IZL2 1156 aaPredicted RBP16.53■□□□□ 0.24
PDE6D-203ENST00000428104 IGSF9Q9P2J2 1179 aa16.53■□□□□ 0.24
PDE6D-203ENST00000428104 SIT1Q9Y3P8 196 aa16.53■□□□□ 0.24
PDE6D-203ENST00000428104 ASPMQ8IZT6 3477 aa16.53■□□□□ 0.24
PDE6D-203ENST00000428104 NT5C1B-RDH14C9J2C7 533 aa16.52■□□□□ 0.24
PDE6D-203ENST00000428104 N4BP1O75113 896 aaKnown RBP16.52■□□□□ 0.24
PDE6D-203ENST00000428104 GLULP15104 373 aa16.52■□□□□ 0.24
PDE6D-203ENST00000428104 MX1P20591 662 aa16.52■□□□□ 0.24
PDE6D-203ENST00000428104 NME8Q8N427 588 aa16.52■□□□□ 0.24
PDE6D-203ENST00000428104 TMEM87AQ8NBN3 555 aa16.52■□□□□ 0.24
PDE6D-203ENST00000428104 SLC22A17Q8WUG5 538 aa16.52■□□□□ 0.24
PDE6D-203ENST00000428104 PPP1R16BQ96T49 567 aa16.52■□□□□ 0.24
PDE6D-203ENST00000428104 ELAC1Q9H777 363 aaKnown RBP16.52■□□□□ 0.24
PDE6D-203ENST00000428104 FAM208BQ5VWN6 2430 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 DENND4AQ7Z401 1863 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 PRR5-ARHGAP8B1AHC4 643 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 METAP2P50579 478 aaKnown RBP eCLIP16.51■□□□□ 0.23
PDE6D-203ENST00000428104 ARHGAP8P85298 464 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 LMNB2Q03252 620 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 MTHFD1LQ6UB35 978 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 FAM228AQ86W67 206 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 ABI1Q8IZP0 508 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 VPS52Q8N1B4 723 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 GPR161Q8N6U8 529 aaKnown RBP16.51■□□□□ 0.23
PDE6D-203ENST00000428104 GPRASP2Q96D09 838 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 RTKNQ9BST9 563 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 ZBP1Q9H171 429 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 SFXN1Q9H9B4 322 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 ZSWIM5Q9P217 1185 aa16.51■□□□□ 0.23
PDE6D-203ENST00000428104 ZZEF1O43149 2961 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 PALM3A6NDB9 673 aaPredicted RBP16.5■□□□□ 0.23
PDE6D-203ENST00000428104 SPDYE4A6NLX3 237 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 ZNF213O14771 459 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 GPR182O15218 404 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 HOXA2O43364 376 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 LRRN2O75325 713 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 TRAF1Q13077 416 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 NMIQ13287 307 aaPredicted RBP16.5■□□□□ 0.23
PDE6D-203ENST00000428104 DSC3Q14574 896 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 BMS1Q14692 1282 aaKnown RBP16.5■□□□□ 0.23
PDE6D-203ENST00000428104 LETM2Q2VYF4 491 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 CLLU1OSQ5K130 101 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 PHLDB3Q6NSJ2 640 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 USP17L6PQ6QN14 398 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 KIAA0319LQ8IZA0 1049 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 GPR152Q8TDT2 470 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 EVI5LQ96CN4 794 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 FOXQ1Q9C009 403 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 USP18Q9UMW8 372 aa16.5■□□□□ 0.23
PDE6D-203ENST00000428104 SPTLC1O15269 473 aa16.49■□□□□ 0.23
PDE6D-203ENST00000428104 HOXB3P14651 431 aaPredicted RBP16.49■□□□□ 0.23
PDE6D-203ENST00000428104 ITGB5P18084 799 aa16.49■□□□□ 0.23
PDE6D-203ENST00000428104 COL9A3Q14050 684 aaPredicted RBP16.49■□□□□ 0.23
PDE6D-203ENST00000428104 KIZQ2M2Z5 673 aa16.49■□□□□ 0.23
PDE6D-203ENST00000428104 IFIT1BQ5T764 474 aaKnown RBP16.49■□□□□ 0.23
PDE6D-203ENST00000428104 FAM43BQ6ZT52 329 aaPredicted RBP16.49■□□□□ 0.23
PDE6D-203ENST00000428104 TMEM173Q86WV6 379 aaPredicted RBP16.49■□□□□ 0.23
PDE6D-203ENST00000428104 SLC44A3Q8N4M1 653 aa16.49■□□□□ 0.23
PDE6D-203ENST00000428104 RNF169Q8NCN4 708 aa16.49■□□□□ 0.23
PDE6D-203ENST00000428104 PIBF1Q8WXW3 757 aa16.49■□□□□ 0.23
PDE6D-203ENST00000428104 CDHR1Q96JP9 859 aa16.49■□□□□ 0.23
PDE6D-203ENST00000428104 OSMRQ99650 979 aa16.49■□□□□ 0.23
PDE6D-203ENST00000428104 AZI2Q9H6S1 392 aa16.49■□□□□ 0.23
PDE6D-203ENST00000428104 RIOX1Q9H6W3 641 aa16.49■□□□□ 0.23
PDE6D-203ENST00000428104 ARHGEF3Q9NR81 526 aa16.49■□□□□ 0.23
PDE6D-203ENST00000428104 SPEGQ15772 3267 aa16.49■□□□□ 0.23
PDE6D-203ENST00000428104 PNMA6FA0A0J9YX94 578 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 CCER2I3L3R5 266 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 CYTH3O43739 400 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 SRFP11831 508 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 TGM1P22735 817 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 KLRC1P26715 233 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 GBP2P32456 591 aaPredicted RBP16.48■□□□□ 0.23
PDE6D-203ENST00000428104 BCAR1P56945 870 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 PPM1JQ5JR12 505 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 ODR4Q5SWX8 454 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 PJA1Q8NG27 643 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 SMARCC2Q8TAQ2 1214 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 TMEM169Q96HH4 297 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 UBAC1Q9BSL1 405 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 SMG5Q9UPR3 1016 aaKnown RBP16.48■□□□□ 0.23
PDE6D-203ENST00000428104 LOXHD1Q8IVV2 1947 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 FANCMQ8IYD8 2048 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 CEP295Q9C0D2 2601 aa16.48■□□□□ 0.23
PDE6D-203ENST00000428104 ALDH7A1P49419 539 aaKnown RBP16.47■□□□□ 0.23
PDE6D-203ENST00000428104 NONOQ15233 471 aaKnown RBP eCLIP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms