RNA–Protein interactions for RNA: ENST00000427978.6

TRPM4-202, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best) BASIC

Gene TRPM4, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-202ENST00000427978 IQCKQ8N0W5 287 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.54□□□□□ -0.088e-7■■□□□ 12.8
TRPM4-202ENST00000427978 DNAJC18Q9H819 358 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 TAS2R14Q9NYV8 317 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 TCEAL9Q9UHQ7 104 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 PCDHA2Q9Y5H9 948 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 CCDC88AQ3V6T2 1871 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 DCDC2CA8MYV0 355 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 SNHG28P0DPA3 235 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 BMP3P12645 472 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 IFNAR2P48551 515 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 SP4Q02446 784 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 COBLL1Q53SF7 1204 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 NLRP14Q86W24 1093 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 CPXCR1Q8N123 301 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 ZNF473Q8WTR7 871 aaKnown RBP14.54□□□□□ -0.08
TRPM4-202ENST00000427978 SLC35C1Q96A29 364 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 CCDC127Q96BQ5 260 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 VEZTQ9HBM0 779 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 ACP6Q9NPH0 428 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 TYW1Q9NV66 732 aaKnown RBP14.54□□□□□ -0.08
TRPM4-202ENST00000427978 SORBS3O60504 671 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 RPA1P27694 616 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 PSMC2P35998 433 aaKnown RBP14.54□□□□□ -0.08
TRPM4-202ENST00000427978 CLK2P49760 499 aaKnown RBP14.54□□□□□ -0.08
TRPM4-202ENST00000427978 SETQ01105 290 aaPredicted RBP14.54□□□□□ -0.08
TRPM4-202ENST00000427978 RBM26Q5T8P6 1007 aaKnown RBP14.54□□□□□ -0.08
TRPM4-202ENST00000427978 PPP1R18Q6NYC8 613 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 CNPY4Q8N129 248 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 CABS1Q96KC9 395 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 CCDC114Q96M63 670 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 CSRNP1Q96S65 589 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 PPP1R9AQ9ULJ8 1098 aa14.54□□□□□ -0.08
TRPM4-202ENST00000427978 TOM1O60784 492 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 HOXD13P35453 343 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 MDH1P40925 334 aaKnown RBP14.53□□□□□ -0.08
TRPM4-202ENST00000427978 ITIH3Q06033 890 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 EDRF1Q3B7T1 1238 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 NBPF9Q3BBW0 867 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 ZFYVE27Q5T4F4 411 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 NSMFQ6X4W1 530 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 MIGA2Q7L4E1 593 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 FRMD5Q7Z6J6 570 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 SYT2Q8N9I0 419 aaPredicted RBP14.53□□□□□ -0.08
TRPM4-202ENST00000427978 MGARPQ8TDB4 240 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 KAT2BQ92831 832 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 FAM163AQ96GL9 167 aaPredicted RBP14.53□□□□□ -0.08
TRPM4-202ENST00000427978 KCNMB3Q9NPA1 279 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 UBE2TQ9NPD8 197 aaPredicted RBP14.53□□□□□ -0.08
TRPM4-202ENST00000427978 PI4KBQ9UBF8 816 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 ARHGEF35A5YM69 484 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 GCLMP48507 274 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 VPS41P49754 854 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 ADCY1Q08828 1119 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 VPS72Q15906 364 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 RINT1Q6NUQ1 792 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 CCDC121Q6ZUS5 278 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 PALB2Q86YC2 1186 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 SYN2Q92777 582 aaPredicted RBP14.53□□□□□ -0.08
TRPM4-202ENST00000427978 PBKQ96KB5 322 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 NAP1L4Q99733 375 aaKnown RBP14.53□□□□□ -0.08
TRPM4-202ENST00000427978 SH3GL2Q99962 352 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 THAP2Q9H0W7 228 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 NHSL1Q5SYE7 1610 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 PHF20L1A8MW92 1017 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 GJC1P36383 396 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 IRX3P78415 501 aaPredicted RBP14.53□□□□□ -0.08
TRPM4-202ENST00000427978 SF3B2Q13435 895 aaKnown RBP14.53□□□□□ -0.08
TRPM4-202ENST00000427978 CBWD6Q4V339 395 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 CBWD3Q5JTY5 395 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 CBWD5Q5RIA9 395 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 ICE2Q659A1 982 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 CCDC17Q96LX7 622 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 CEP89Q96ST8 783 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 PARVGQ9HBI0 331 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 METTL14Q9HCE5 456 aaKnown RBP14.53□□□□□ -0.08
TRPM4-202ENST00000427978 BZW2Q9Y6E2 419 aaKnown RBP14.53□□□□□ -0.08
TRPM4-202ENST00000427978 SCN7AQ01118 1682 aa14.53□□□□□ -0.08
TRPM4-202ENST00000427978 ASTN1O14525 1302 aa14.52□□□□□ -0.08
TRPM4-202ENST00000427978 K7ENM7 598 aa14.52□□□□□ -0.08
TRPM4-202ENST00000427978 SHOX2O60902 331 aaPredicted RBP14.52□□□□□ -0.08
TRPM4-202ENST00000427978 EPHA7Q15375 998 aa14.52□□□□□ -0.08
TRPM4-202ENST00000427978 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.08
TRPM4-202ENST00000427978 MICALCLQ6ZW33 695 aa14.52□□□□□ -0.08
TRPM4-202ENST00000427978 PIK3R5Q8WYR1 880 aa14.52□□□□□ -0.08
TRPM4-202ENST00000427978 ARHGEF26Q96DR7 871 aa14.52□□□□□ -0.08
TRPM4-202ENST00000427978 GOLGA6L10A0A0M3HER8 536 aa14.52□□□□□ -0.09
TRPM4-202ENST00000427978 RBAK-RBAKDNI3L0D1 243 aa14.52□□□□□ -0.09
TRPM4-202ENST00000427978 PDXKO00764 312 aa14.52□□□□□ -0.09
TRPM4-202ENST00000427978 SSR1P43307 286 aaKnown RBP14.52□□□□□ -0.09
TRPM4-202ENST00000427978 NT5C2P49902 561 aa14.52□□□□□ -0.09
TRPM4-202ENST00000427978 MYL7Q01449 175 aa14.52□□□□□ -0.09
TRPM4-202ENST00000427978 PTGISQ16647 500 aa14.52□□□□□ -0.09
TRPM4-202ENST00000427978 CCDC38Q502W7 563 aa14.52□□□□□ -0.09
TRPM4-202ENST00000427978 BTBD6Q96KE9 485 aa14.52□□□□□ -0.09
TRPM4-202ENST00000427978 ISCUQ9H1K1 167 aa14.52□□□□□ -0.09
TRPM4-202ENST00000427978 EPN3Q9H201 632 aa14.52□□□□□ -0.09
TRPM4-202ENST00000427978 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.09
TRPM4-202ENST00000427978 IGSF9BQ9UPX0 1349 aa14.51□□□□□ -0.09
TRPM4-202ENST00000427978 FERP16591 822 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms