RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 SHC2P98077 582 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 NEDD9Q14511 834 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 PTPN14Q15678 1187 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 GPATCH4Q5T3I0 446 aaKnown RBP10.63□□□□□ -0.71
LSG1-202ENST00000427461 VPS53Q5VIR6 699 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 FCHSD1Q86WN1 690 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 SLC39A11Q8N1S5 342 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 TRAPPC12Q8WVT3 735 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 JMJD4Q9H9V9 463 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 CDHR5Q9HBB8 845 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 ATP6V0A4Q9HBG4 840 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 TCP11L1Q9NUJ3 509 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 RNF19AQ9NV58 838 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 GMEB2Q9UKD1 530 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 GINS2Q9Y248 185 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 NOC2LQ9Y3T9 749 aaKnown RBP10.63□□□□□ -0.71
LSG1-202ENST00000427461 MTF2Q9Y483 593 aaPredicted RBP10.63□□□□□ -0.71
LSG1-202ENST00000427461 PCDHA1Q9Y5I3 950 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 WDFY3Q8IZQ1 3526 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 LAMA4Q16363 1823 aa10.63□□□□□ -0.71
LSG1-202ENST00000427461 DHX16O60231 1041 aaKnown RBP10.62□□□□□ -0.71
LSG1-202ENST00000427461 PPP1R11O60927 126 aaPredicted RBP10.62□□□□□ -0.71
LSG1-202ENST00000427461 INSRRP14616 1297 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 NCLP19338 710 aaKnown RBP10.62□□□□□ -0.71
LSG1-202ENST00000427461 PPM1AP35813 382 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 METAP2P50579 478 aaKnown RBP eCLIP10.62□□□□□ -0.71
LSG1-202ENST00000427461 GHRHRQ02643 423 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 SLC24A5Q71RS6 500 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 TMEM40Q8WWA1 233 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 GLG1Q92896 1179 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 MYADMQ96S97 322 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 ZKSCAN3Q9BRR0 538 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 SFXN1Q9H9B4 322 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 ECHDC1Q9NTX5 307 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 ZSCAN32Q9NX65 697 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 ANAPC4Q9UJX5 808 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 GCN1Q92616 2671 aaKnown RBP10.62□□□□□ -0.71
LSG1-202ENST00000427461 NBEAQ8NFP9 2946 aa10.62□□□□□ -0.71
LSG1-202ENST00000427461 DOCK8Q8NF50 2099 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 GSTTP1A0A1W2PQM5 241 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 TBC1D4O60343 1298 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 STARD6P59095 220 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 KRT76Q01546 638 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 NONOQ15233 471 aaKnown RBP eCLIP10.61□□□□□ -0.71
LSG1-202ENST00000427461 GNPTABQ3T906 1256 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 LRSAM1Q6UWE0 723 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 VPS52Q8N1B4 723 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 TMEM87AQ8NBN3 555 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 NELL1Q92832 810 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 BORCS6Q96GS4 357 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 INPP4AQ96PE3 977 aaPredicted RBP10.61□□□□□ -0.71
LSG1-202ENST00000427461 BCO2Q9BYV7 579 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 TMEM117Q9H0C3 514 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 ZBP1Q9H171 429 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 C1orf112Q9NSG2 853 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 TMEM161AQ9NX61 479 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 ST3GAL5Q9UNP4 418 aa10.61□□□□□ -0.71
LSG1-202ENST00000427461 CNOT1A5YKK6 2376 aaKnown RBP10.61□□□□□ -0.71
LSG1-202ENST00000427461 CEP295Q9C0D2 2601 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 RALGAPA1Q6GYQ0 2036 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 FIBPO43427 364 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 RPS6KA5O75582 802 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 MYBP10242 640 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 FAM189BP81408 668 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 RING1Q06587 406 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 SNW1Q13573 536 aaKnown RBP10.6□□□□□ -0.71
LSG1-202ENST00000427461 WTAPQ15007 396 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 ZMYM1Q5SVZ6 1142 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 UNQ6494/PRO21346Q6UXR6 183 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 PRR23CQ6ZRP0 262 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 TMEM173Q86WV6 379 aaPredicted RBP10.6□□□□□ -0.71
LSG1-202ENST00000427461 LRRC43Q8N309 656 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 PANK1Q8TE04 598 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 TTC14Q96N46 770 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 AMNQ9BXJ7 453 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 SEMA4GQ9NTN9 838 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 ERAP1Q9NZ08 941 aa10.6□□□□□ -0.71
LSG1-202ENST00000427461 KDM3AQ9Y4C1 1321 aa10.59□□□□□ -0.71
LSG1-202ENST00000427461 KANSL1LA0AUZ9 987 aa10.59□□□□□ -0.71
LSG1-202ENST00000427461 ATP9AO75110 1047 aa10.59□□□□□ -0.71
LSG1-202ENST00000427461 CD72P21854 359 aa10.59□□□□□ -0.71
LSG1-202ENST00000427461 UBXN2BQ14CS0 331 aa10.59□□□□□ -0.71
LSG1-202ENST00000427461 PLCB4Q15147 1175 aa10.59□□□□□ -0.71
LSG1-202ENST00000427461 PNMA1Q8ND90 353 aa10.59□□□□□ -0.71
LSG1-202ENST00000427461 BBXQ8WY36 941 aaPredicted RBP10.59□□□□□ -0.71
LSG1-202ENST00000427461 PPP1R16BQ96T49 567 aa10.59□□□□□ -0.71
LSG1-202ENST00000427461 RPP25Q9BUL9 199 aaKnown RBP10.59□□□□□ -0.71
LSG1-202ENST00000427461 ELAC1Q9H777 363 aaKnown RBP10.59□□□□□ -0.71
LSG1-202ENST00000427461 EPS15L1Q9UBC2 864 aa10.59□□□□□ -0.71
LSG1-202ENST00000427461 LHX6Q9UPM6 363 aa10.59□□□□□ -0.71
LSG1-202ENST00000427461 PCDHA2Q9Y5H9 948 aa10.59□□□□□ -0.71
LSG1-202ENST00000427461 MYH15Q9Y2K3 1946 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 RRN3P2A6NIE6 340 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 FAM170BA6NMN3 283 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 HMMRO75330 724 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 CTSAP10619 480 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 BCAR1P56945 870 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 HAND2P61296 217 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 GPC5P78333 572 aa10.58□□□□□ -0.72
LSG1-202ENST00000427461 CLLU1OSQ5K130 101 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms