RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 TNIP1Q15025 636 aa8.12□□□□□ -1.11
LINC01108-201ENST00000427276 WLSQ5T9L3 541 aa8.12□□□□□ -1.11
LINC01108-201ENST00000427276 C12orf60Q5U649 245 aa8.12□□□□□ -1.11
LINC01108-201ENST00000427276 ZNF746Q6NUN9 644 aaPredicted RBP8.12□□□□□ -1.11
LINC01108-201ENST00000427276 SEPT14Q6ZU15 432 aa8.12□□□□□ -1.11
LINC01108-201ENST00000427276 ARMC9Q7Z3E5 817 aa8.12□□□□□ -1.11
LINC01108-201ENST00000427276 SLC35G2Q8TBE7 412 aa8.12□□□□□ -1.11
LINC01108-201ENST00000427276 CEP95Q96GE4 821 aa8.12□□□□□ -1.11
LINC01108-201ENST00000427276 ATP6V0A4Q9HBG4 840 aa8.12□□□□□ -1.11
LINC01108-201ENST00000427276 CCDC87Q9NVE4 849 aa8.12□□□□□ -1.11
LINC01108-201ENST00000427276 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.12□□□□□ -1.11
LINC01108-201ENST00000427276 NOP53Q9NZM5 478 aaKnown RBP8.12□□□□□ -1.11
LINC01108-201ENST00000427276 MTRF1LQ9UGC7 380 aaKnown RBP8.12□□□□□ -1.11
LINC01108-201ENST00000427276 PPP1R9AQ9ULJ8 1098 aa8.12□□□□□ -1.11
LINC01108-201ENST00000427276 AGAP1Q9UPQ3 857 aa8.12□□□□□ -1.11
LINC01108-201ENST00000427276 DISP2A7MBM2 1401 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 NUP188Q5SRE5 1749 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 GSTTP1A0A1W2PQM5 241 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 C21orf2O43822 256 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 BAG3O95817 575 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 PCK1P35558 622 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 ALDH5A1P51649 535 aaPredicted RBP8.11□□□□□ -1.11
LINC01108-201ENST00000427276 CASP5P51878 434 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 LACTBP83111 547 aaPredicted RBP8.11□□□□□ -1.11
LINC01108-201ENST00000427276 XRCC4Q13426 336 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 ERMARDQ5T6L9 678 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 CAPRIN2Q6IMN6 1127 aaKnown RBP8.11□□□□□ -1.11
LINC01108-201ENST00000427276 CAPN12Q6ZSI9 719 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 ZBTB10Q96DT7 871 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 KDM4CQ9H3R0 1056 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 BCAS3Q9H6U6 928 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 ERVK-5Q9HDB9 667 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 RASAL2Q9UJF2 1139 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 PNMA3Q9UL41 463 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 CAMTA1Q9Y6Y1 1673 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 USP17L15C9J2P7 530 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 USP17L13C9JLJ4 530 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 USP17L11C9JVI0 530 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 USP17L18D6R9N7 530 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 USP17L22D6RA61 530 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 USP17L17D6RBQ6 530 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 USP17L19D6RCP7 530 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 USP17L20D6RJB6 530 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 M0R2N6 131 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 CREB1P16220 341 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 CALRP27797 417 aaKnown RBP8.11□□□□□ -1.11
LINC01108-201ENST00000427276 CYP2J2P51589 502 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 RPS8P62241 208 aaKnown RBP8.11□□□□□ -1.11
LINC01108-201ENST00000427276 ATP11AP98196 1134 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 SATB1Q01826 763 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 USP17L24Q0WX57 530 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 TAF11Q15544 211 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 ZFYVE27Q5T4F4 411 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 USP17L6PQ6QN14 398 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 VSIG1Q86XK7 387 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 TRIM59Q8IWR1 403 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 SYCE1Q8N0S2 351 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 ACTRT1Q8TDG2 376 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 SCFD1Q8WVM8 642 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 EDEM3Q9BZQ6 932 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 LRP6O75581 1613 aa8.11□□□□□ -1.11
LINC01108-201ENST00000427276 PALM3A6NDB9 673 aaPredicted RBP8.1□□□□□ -1.11
LINC01108-201ENST00000427276 SNAP25P60880 206 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 GNPTABQ3T906 1256 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 TBC1D10BQ4KMP7 808 aaPredicted RBP8.1□□□□□ -1.11
LINC01108-201ENST00000427276 PARP10Q53GL7 1025 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 SLC30A10Q6XR72 485 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 PHLDB2Q86SQ0 1253 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 ERICH1Q86X53 443 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 SFR1Q86XK3 245 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 PROM2Q8N271 834 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 RBM46Q8TBY0 533 aaKnown RBP8.1□□□□□ -1.11
LINC01108-201ENST00000427276 FAXDC2Q96IV6 333 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 AJAP1Q9UKB5 411 aaPredicted RBP8.1□□□□□ -1.11
LINC01108-201ENST00000427276 TRPC6Q9Y210 931 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 COL16A1Q07092 1604 aaPredicted RBP8.1□□□□□ -1.11
LINC01108-201ENST00000427276 DDX3XO00571 662 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC01108-201ENST00000427276 PPIP5K2O43314 1243 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 CHMP2AO43633 222 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 MGRN1O60291 552 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 GNA14O95837 355 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 MYBP10242 640 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 PON1P27169 355 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 STX2P32856 288 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 CDK8P49336 464 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 ERFP50548 548 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 PSMD2Q13200 908 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 GRIK5Q16478 980 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 KIAA1755Q5JYT7 1200 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 TTBK2Q6IQ55 1244 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 ZNF449Q6P9G9 518 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 KCTD1Q719H9 257 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 IRF2BP2Q7Z5L9 587 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 JAMLQ86YT9 394 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 RNF25Q96BH1 459 aaPredicted RBP8.1□□□□□ -1.11
LINC01108-201ENST00000427276 ERP44Q9BS26 406 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 PAGR1Q9BTK6 254 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 SLITRK6Q9H5Y7 841 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 ASIC3Q9UHC3 531 aa8.1□□□□□ -1.11
LINC01108-201ENST00000427276 C15orf41Q9Y2V0 281 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms