RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ENC1O14682 589 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 CCNE1P24864 410 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 DPY19L2Q6NUT2 758 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 TRIM72Q6ZMU5 477 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 LRRN2O75325 713 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 HAUS5O94927 633 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 C10orf88Q9H8K7 445 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 ABCF3Q9NUQ8 709 aa15.41■□□□□ 0.06
PTPN13-203ENST00000427191 GOLGA8RI6L899 631 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 TFAMQ00059 246 aaKnown RBP15.4■□□□□ 0.06
PTPN13-203ENST00000427191 PLEKHM3Q6ZWE6 761 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 TBC1D19Q8N5T2 526 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 CEP72Q9P209 647 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 TARSL2A2RTX5 802 aaKnown RBP15.4■□□□□ 0.06
PTPN13-203ENST00000427191 TAF5LO75529 589 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 MECOMQ03112 1051 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 ACAP3Q96P50 834 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 GMNCA6NCL1 334 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 IRX1P78414 480 aaPredicted RBP15.4■□□□□ 0.06
PTPN13-203ENST00000427191 NR5A1Q13285 461 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 LRRC31Q6UY01 552 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 FIS1Q9Y3D6 152 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 MOCS3O95396 460 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 SYDE1Q6ZW31 735 aaPredicted RBP15.4■□□□□ 0.06
PTPN13-203ENST00000427191 GPT2Q8TD30 523 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 ULK4Q96C45 1275 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 CYTH2Q99418 400 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 ACSL3O95573 720 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 APOA4P06727 396 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 CHRNA3P32297 505 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 EIF4A3P38919 411 aaKnown RBP15.4■□□□□ 0.06
PTPN13-203ENST00000427191 FAM98CQ17RN3 349 aaKnown RBP15.4■□□□□ 0.06
PTPN13-203ENST00000427191 THEM5Q8N1Q8 247 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 KANSL2Q9H9L4 492 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 MYO5CQ9NQX4 1742 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 INO80B-WBP1J3KQ70 363 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 KRT72Q14CN4 511 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 BBS9Q3SYG4 887 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 ZNF594Q96JF6 807 aaPredicted RBP15.4■□□□□ 0.06
PTPN13-203ENST00000427191 INO80BQ9C086 356 aaPredicted RBP15.4■□□□□ 0.06
PTPN13-203ENST00000427191 PCDHA5Q9Y5H7 936 aa15.4■□□□□ 0.06
PTPN13-203ENST00000427191 PPP2R2AP63151 447 aa15.39■□□□□ 0.06
PTPN13-203ENST00000427191 ZNF229Q9UJW7 825 aa15.39■□□□□ 0.06
PTPN13-203ENST00000427191 BTBD18B2RXH4 712 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 MMP1P03956 469 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 PNMA6AP0CW24 399 aaPredicted RBP15.39■□□□□ 0.05
PTPN13-203ENST00000427191 CNGA3Q16281 694 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 HOMEZQ8IX15 550 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 FAM167AQ96KS9 214 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 NFU1Q9UMS0 254 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 PNMA6EA0A0J9YXQ4 647 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 WDR47O94967 919 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 FGGP02679 453 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 KYAT1Q16773 422 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 DHX36Q9H2U1 1008 aaKnown RBP15.39■□□□□ 0.05
PTPN13-203ENST00000427191 SRPRBQ9Y5M8 271 aaKnown RBP15.39■□□□□ 0.05
PTPN13-203ENST00000427191 GFPT2O94808 682 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 CAPRIN2Q6IMN6 1127 aaKnown RBP15.39■□□□□ 0.05
PTPN13-203ENST00000427191 MLH3Q9UHC1 1453 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 DYNLT1P63172 113 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 SCRN1Q12765 414 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 TTC23LQ6PF05 361 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 ANKS3Q6ZW76 656 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 RRM2BQ7LG56 351 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 ERICH1Q86X53 443 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 PRUNE1Q86TP1 453 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 ATP11CQ8NB49 1132 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 DCPSQ96C86 337 aaKnown RBP15.39■□□□□ 0.05
PTPN13-203ENST00000427191 MRPS26Q9BYN8 205 aaKnown RBP15.39■□□□□ 0.05
PTPN13-203ENST00000427191 SESN1Q9Y6P5 492 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 NDST4Q9H3R1 872 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 GINM1Q9NU53 330 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 STMN3Q9NZ72 180 aa15.39■□□□□ 0.05
PTPN13-203ENST00000427191 GOLGA8SH3BPF8 625 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 FGAP02671 866 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 HNRNPCP07910 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
PTPN13-203ENST00000427191 IL13P35225 146 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 ELMOD1Q8N336 334 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 TEKT4Q8WW24 435 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 PAGR1Q9BTK6 254 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 LEMD3Q9Y2U8 911 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 RGS9BPQ6ZS82 235 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 CEP95Q96GE4 821 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 PCDHGB4Q9UN71 923 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 XDHP47989 1333 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 TJAP1Q5JTD0 557 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 TRIM69Q86WT6 500 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 SULF1Q8IWU6 871 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 CDC26Q8NHZ8 85 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 OTUD7AQ8TE49 926 aaPredicted RBP15.38■□□□□ 0.05
PTPN13-203ENST00000427191 IFT43Q96FT9 208 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 CLIC4Q9Y696 253 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 SLCO1A2P46721 670 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 TBC1D1Q86TI0 1168 aaPredicted RBP15.38■□□□□ 0.05
PTPN13-203ENST00000427191 NCAPG2Q86XI2 1143 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 PARP9Q8IXQ6 854 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 SCFD1Q8WVM8 642 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 GPKOWQ92917 476 aaPredicted RBP eCLIP15.38■□□□□ 0.05
PTPN13-203ENST00000427191 CMTM5Q96DZ9 223 aa15.38■□□□□ 0.05
PTPN13-203ENST00000427191 DDX28Q9NUL7 540 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms