RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 PDXDC2PQ6P474 469 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 ASCL5Q7RTU5 278 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 TRMT1LQ7Z2T5 733 aaKnown RBP16.69■□□□□ 0.26
PDAP1-202ENST00000426447 RAB11FIP4Q86YS3 637 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 METTL13Q8N6R0 699 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 TMEM87AQ8NBN3 555 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 PGBD1Q96JS3 809 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 TMEM87BQ96K49 555 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 NECTIN4Q96NY8 510 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 MTA3Q9BTC8 594 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 MFSD1Q9H3U5 465 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 ZNF302Q9NR11 478 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 SPG21Q9NZD8 308 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 SLC12A7Q9Y666 1083 aa16.69■□□□□ 0.26
PDAP1-202ENST00000426447 COL1A2P08123 1366 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 KMT2EQ8IZD2 1858 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 C2CD4DB7Z1M9 353 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 BRD1O95696 1058 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 FOSP01100 380 aaPredicted RBP16.68■□□□□ 0.26
PDAP1-202ENST00000426447 GSPT1P15170 499 aaKnown RBP16.68■□□□□ 0.26
PDAP1-202ENST00000426447 ZSCAN20P17040 1043 aaPredicted RBP16.68■□□□□ 0.26
PDAP1-202ENST00000426447 PBX3P40426 434 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 NAPAP54920 295 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 SWSAP1Q6NVH7 229 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 MIS18BP1Q6P0N0 1132 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 ABHD15Q6UXT9 468 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 LRRC55Q6ZSA7 311 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 FAM228AQ86W67 206 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 FANCBQ8NB91 859 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 RNF169Q8NCN4 708 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 MAP4K1Q92918 833 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 CASD1Q96PB1 797 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 ADAM7Q9H2U9 754 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 POMKQ9H5K3 350 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 CDH22Q9UJ99 828 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 USP34Q70CQ2 3546 aa16.68■□□□□ 0.26
PDAP1-202ENST00000426447 IGKV6D-21A0A0A0MT36 114 aa16.67■□□□□ 0.26
PDAP1-202ENST00000426447 SH2B2O14492 632 aaPredicted RBP16.67■□□□□ 0.26
PDAP1-202ENST00000426447 VTNP04004 478 aa16.67■□□□□ 0.26
PDAP1-202ENST00000426447 MTHFRP42898 656 aa16.67■□□□□ 0.26
PDAP1-202ENST00000426447 SMC1AQ14683 1233 aaKnown RBP16.67■□□□□ 0.26
PDAP1-202ENST00000426447 SYNE3Q6ZMZ3 975 aa16.67■□□□□ 0.26
PDAP1-202ENST00000426447 LRRC43Q8N309 656 aa16.67■□□□□ 0.26
PDAP1-202ENST00000426447 TMEM105Q8N8V8 129 aa16.67■□□□□ 0.26
PDAP1-202ENST00000426447 MRPL43Q8N983 215 aaKnown RBP16.67■□□□□ 0.26
PDAP1-202ENST00000426447 RBM8AQ9Y5S9 174 aaKnown RBP16.67■□□□□ 0.26
PDAP1-202ENST00000426447 HCFC2Q9Y5Z7 792 aa16.67■□□□□ 0.26
PDAP1-202ENST00000426447 PRR23AA6NEV1 266 aa16.66■□□□□ 0.26
PDAP1-202ENST00000426447 MEIS1O00470 390 aa16.66■□□□□ 0.26
PDAP1-202ENST00000426447 SGSM2O43147 1006 aa16.66■□□□□ 0.26
PDAP1-202ENST00000426447 CCNE2O96020 404 aa16.66■□□□□ 0.26
PDAP1-202ENST00000426447 NBL1P41271 181 aa16.66■□□□□ 0.26
PDAP1-202ENST00000426447 DSC3Q14574 896 aa16.66■□□□□ 0.26
PDAP1-202ENST00000426447 ASTLQ6HA08 431 aaPredicted RBP16.66■□□□□ 0.26
PDAP1-202ENST00000426447 TMTC3Q6ZXV5 915 aa16.66■□□□□ 0.26
PDAP1-202ENST00000426447 CCDC60Q8IWA6 550 aaPredicted RBP16.66■□□□□ 0.26
PDAP1-202ENST00000426447 ANO3Q9BYT9 981 aa16.66■□□□□ 0.26
PDAP1-202ENST00000426447 RIC8AQ9NPQ8 531 aa16.66■□□□□ 0.26
PDAP1-202ENST00000426447 LIMD1Q9UGP4 676 aa16.66■□□□□ 0.26
PDAP1-202ENST00000426447 ZDBF2Q9HCK1 2354 aa16.66■□□□□ 0.26
PDAP1-202ENST00000426447 ZFHX2Q9C0A1 2572 aaPredicted RBP16.66■□□□□ 0.26
PDAP1-202ENST00000426447 C2orf71A6NGG8 1288 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 GPR32O75388 356 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 CXCL14O95715 111 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 ASGR2P07307 311 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 WEE2P0C1S8 567 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 LIFRP42702 1097 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 ADCY7P51828 1080 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 ATAT1Q5SQI0 421 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 RARS2Q5T160 578 aaKnown RBP16.65■□□□□ 0.26
PDAP1-202ENST00000426447 WWC2Q6AWC2 1192 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 PLA2G4DQ86XP0 818 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 PLCD3Q8N3E9 789 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 TDRD5Q8NAT2 981 aaKnown RBP16.65■□□□□ 0.26
PDAP1-202ENST00000426447 BBXQ8WY36 941 aaPredicted RBP16.65■□□□□ 0.26
PDAP1-202ENST00000426447 NKD2Q969F2 451 aaPredicted RBP16.65■□□□□ 0.26
PDAP1-202ENST00000426447 SMOC2Q9H3U7 446 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 TCEAL9Q9UHQ7 104 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 DBR1Q9UK59 544 aaKnown RBP16.65■□□□□ 0.26
PDAP1-202ENST00000426447 AKT3Q9Y243 479 aa16.65■□□□□ 0.26
PDAP1-202ENST00000426447 SMCO2A6NFE2 343 aa16.64■□□□□ 0.25
PDAP1-202ENST00000426447 ZBTB42B2RXF5 422 aa16.64■□□□□ 0.25
PDAP1-202ENST00000426447 CLASP2O75122 1294 aaKnown RBP16.64■□□□□ 0.25
PDAP1-202ENST00000426447 C22orf31O95567 290 aa16.64■□□□□ 0.25
PDAP1-202ENST00000426447 ATP4AP20648 1035 aa16.64■□□□□ 0.25
PDAP1-202ENST00000426447 ALDH7A1P49419 539 aaKnown RBP16.64■□□□□ 0.25
PDAP1-202ENST00000426447 NLRP11P59045 1033 aaKnown RBP16.64■□□□□ 0.25
PDAP1-202ENST00000426447 MCTP2Q6DN12 878 aa16.64■□□□□ 0.25
PDAP1-202ENST00000426447 FRMD5Q7Z6J6 570 aa16.64■□□□□ 0.25
PDAP1-202ENST00000426447 MICU3Q86XE3 530 aa16.64■□□□□ 0.25
PDAP1-202ENST00000426447 ECHDC2Q86YB7 292 aa16.64■□□□□ 0.25
PDAP1-202ENST00000426447 C12orf76Q8N812 135 aaPredicted RBP16.64■□□□□ 0.25
PDAP1-202ENST00000426447 FLCNQ8NFG4 579 aa16.64■□□□□ 0.25
PDAP1-202ENST00000426447 EXOC6Q8TAG9 804 aa16.64■□□□□ 0.25
PDAP1-202ENST00000426447 MAP7D2Q96T17 732 aa16.64■□□□□ 0.25
PDAP1-202ENST00000426447 CEP131Q9UPN4 1083 aa16.64■□□□□ 0.25
PDAP1-202ENST00000426447 FNDC1Q4ZHG4 1894 aaPredicted RBP16.63■□□□□ 0.25
PDAP1-202ENST00000426447 NT5C1B-RDH14C9J2C7 533 aa16.63■□□□□ 0.25
PDAP1-202ENST00000426447 MAGEB2O15479 319 aa16.63■□□□□ 0.25
PDAP1-202ENST00000426447 TMOD1P28289 359 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms