RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 PRRC2BQ5JSZ5 2229 aaKnown RBP7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 PAGE1O75459 146 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 CNMDO75829 334 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 SLC3A2P08195 630 aaKnown RBP7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 ACRP10323 421 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 ATF4P18848 351 aaPredicted RBP7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 GARTP22102 1010 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 MAPK4P31152 587 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 CCNA1P78396 465 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 KRT76Q01546 638 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 PDE4BQ07343 736 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 IKBKEQ14164 716 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 MCMDC2Q4G0Z9 681 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 KIAA1755Q5JYT7 1200 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 PCNX4Q63HM2 1172 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 SCARA3Q6AZY7 606 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 GDF6Q6KF10 455 aaPredicted RBP7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 FBXL19Q6PCT2 694 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 PSRC1Q6PGN9 363 aaPredicted RBP7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 LBX2Q6XYB7 198 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 C1orf229Q6ZS94 237 aaPredicted RBP7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 PLEKHH3Q7Z736 793 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 TICAM2Q86XR7 235 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 CLEC10AQ8IUN9 316 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 SPICE1Q8N0Z3 855 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 NUDT8Q8WV74 236 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 EDARADDQ8WWZ3 215 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 WNT8BQ93098 351 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 SEC16BQ96JE7 1060 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 EMILIN2Q9BXX0 1053 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 NAPBQ9H115 298 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 IRF2BPLQ9H1B7 796 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 MTIF3Q9H2K0 278 aaKnown RBP7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 VCPKMTQ9H867 229 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 CLIP2Q9UDT6 1046 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 TLR6Q9Y2C9 796 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 CHD8Q9HCK8 2581 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 ATAD5Q96QE3 1844 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 PTPRFP10586 1907 aa7.29□□□□□ -1.24
NIF3L1-207ENST00000426253 H3BRJ5 948 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 PRDM1O75626 825 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 PF4P02776 101 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 MYOGP15173 224 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 TFE3P19532 575 aaPredicted RBP7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 SDSP20132 328 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 ARNTP27540 789 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 DNAJA1P31689 397 aaKnown RBP7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 TFAP4Q01664 338 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 PPARAQ07869 468 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 LRRC14Q15048 493 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 RASIP1Q5U651 963 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 WDR78Q5VTH9 848 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 ZNF365Q70YC5 407 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 GPR142Q7Z601 462 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 TRIM42Q8IWZ5 723 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 GALNT6Q8NCL4 622 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 MKL1Q969V6 931 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 EAF1Q96JC9 268 aaPredicted RBP7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 BTBD6Q96KE9 485 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 FAM227BQ96M60 508 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 PORCNQ9H237 461 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 EPB41L4AQ9HCS5 686 aaPredicted RBP7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 JPH1Q9HDC5 661 aaPredicted RBP7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 INCENPQ9NQS7 918 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 BTBD7Q9P203 1132 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 NYAP2Q9P242 653 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 PPME1Q9Y570 386 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 ATRXP46100 2492 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 PLXNA3P51805 1871 aa7.28□□□□□ -1.24
NIF3L1-207ENST00000426253 ZNF536O15090 1300 aa7.27□□□□□ -1.24
NIF3L1-207ENST00000426253 CHD7Q9P2D1 2997 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 PRR23AA6NEV1 266 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 F5H6K3 240 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 H0Y858 1186 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 WDR46O15213 610 aaKnown RBP7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 OIP5O43482 229 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 LILRB5O75023 590 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 FLOT1O75955 427 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 TIMP1P01033 207 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 FGAP02671 866 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 ALBP02768 609 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 TSPY3P0CV98 308 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 TSPY8P0CW00 308 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 CSF2RAP15509 400 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 POU3F3P20264 500 aaPredicted RBP7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 EPHA1P21709 976 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 KCNA5P22460 613 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 AFF1P51825 1210 aaKnown RBP7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 KLRC3Q07444 240 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 NMIQ13287 307 aaPredicted RBP7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 PLS1Q14651 629 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 ALX1Q15699 326 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 FAM47AQ5JRC9 791 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 VPS53Q5VIR6 699 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 MFSD5Q6N075 450 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 C16orf59Q7L2K0 433 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 TMEM199Q8N511 208 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 IL22RA1Q8N6P7 574 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 NEDD1Q8NHV4 660 aa7.27□□□□□ -1.25
NIF3L1-207ENST00000426253 ARNTL2Q8WYA1 636 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms