RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 NME8Q8N427 588 aa27.3■■□□□ 1.96
VEGFA-209ENST00000425836 CALML4Q96GE6 196 aa27.3■■□□□ 1.96
VEGFA-209ENST00000425836 CDK5RAP3Q96JB5 506 aa27.3■■□□□ 1.96
VEGFA-209ENST00000425836 CCDC43Q96MW1 224 aaKnown RBP27.3■■□□□ 1.96
VEGFA-209ENST00000425836 LBHD1Q9BQE6 289 aaPredicted RBP27.3■■□□□ 1.96
VEGFA-209ENST00000425836 SCAND2PQ9GZW5 306 aaPredicted RBP27.3■■□□□ 1.96
VEGFA-209ENST00000425836 NT5C3AQ9H0P0 336 aa27.3■■□□□ 1.96
VEGFA-209ENST00000425836 MYH15Q9Y2K3 1946 aa27.3■■□□□ 1.96
VEGFA-209ENST00000425836 WDR81Q562E7 1941 aa27.29■■□□□ 1.96
VEGFA-209ENST00000425836 CTSHP09668 335 aa27.29■■□□□ 1.96
VEGFA-209ENST00000425836 MAGEA10P43363 369 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-209ENST00000425836 POLGP54098 1239 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-209ENST00000425836 KARSQ15046 597 aaKnown RBP27.29■■□□□ 1.96
VEGFA-209ENST00000425836 TMEM199Q8N511 208 aa27.29■■□□□ 1.96
VEGFA-209ENST00000425836 SLC7A3Q8WY07 619 aa27.29■■□□□ 1.96
VEGFA-209ENST00000425836 JPH2Q9BR39 696 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-209ENST00000425836 BHMT2Q9H2M3 363 aa27.29■■□□□ 1.96
VEGFA-209ENST00000425836 RSPH10B2B2RC85 870 aa27.28■■□□□ 1.96
VEGFA-209ENST00000425836 EYA4O95677 639 aa27.28■■□□□ 1.96
VEGFA-209ENST00000425836 RPLP2P05387 115 aaKnown RBP27.28■■□□□ 1.96
VEGFA-209ENST00000425836 RSPH10BP0C881 870 aa27.28■■□□□ 1.96
VEGFA-209ENST00000425836 TMOD1P28289 359 aa27.28■■□□□ 1.96
VEGFA-209ENST00000425836 DRP2Q13474 957 aa27.28■■□□□ 1.96
VEGFA-209ENST00000425836 FAM26DQ5JW98 314 aa27.28■■□□□ 1.96
VEGFA-209ENST00000425836 EXOC8Q8IYI6 725 aa27.28■■□□□ 1.96
VEGFA-209ENST00000425836 KCTD17Q8N5Z5 321 aa27.28■■□□□ 1.96
VEGFA-209ENST00000425836 BMP2KQ9NSY1 1161 aaPredicted RBP27.28■■□□□ 1.96
VEGFA-209ENST00000425836 CHRNA1P02708 482 aa27.27■■□□□ 1.96
VEGFA-209ENST00000425836 CSF2RAP15509 400 aa27.27■■□□□ 1.96
VEGFA-209ENST00000425836 TMEM62Q0P6H9 643 aa27.27■■□□□ 1.96
VEGFA-209ENST00000425836 GPNMBQ14956 572 aa27.27■■□□□ 1.96
VEGFA-209ENST00000425836 SHC4Q6S5L8 630 aa27.27■■□□□ 1.96
VEGFA-209ENST00000425836 TRIP12Q14669 1992 aaPredicted RBP27.27■■□□□ 1.96
VEGFA-209ENST00000425836 ARHGEF35A5YM69 484 aa27.26■■□□□ 1.96
VEGFA-209ENST00000425836 DGAT1O75907 488 aa27.26■■□□□ 1.96
VEGFA-209ENST00000425836 PLCG1P19174 1290 aa27.26■■□□□ 1.96
VEGFA-209ENST00000425836 MRPS6P82932 125 aaKnown RBP27.26■■□□□ 1.96
VEGFA-209ENST00000425836 MGAT3Q09327 533 aa27.26■■□□□ 1.96
VEGFA-209ENST00000425836 EMC2Q15006 297 aa27.26■■□□□ 1.96
VEGFA-209ENST00000425836 RASSF8Q8NHQ8 419 aa27.26■■□□□ 1.96
VEGFA-209ENST00000425836 LRRC15Q8TF66 581 aa27.26■■□□□ 1.96
VEGFA-209ENST00000425836 GDPD2Q9HCC8 539 aa27.26■■□□□ 1.96
VEGFA-209ENST00000425836 XPNPEP1Q9NQW7 623 aa27.26■■□□□ 1.96
VEGFA-209ENST00000425836 VTNP04004 478 aa27.26■■□□□ 1.95
VEGFA-209ENST00000425836 TXLNAP40222 546 aa27.26■■□□□ 1.95
VEGFA-209ENST00000425836 MBTPS1Q14703 1052 aa27.26■■□□□ 1.95
VEGFA-209ENST00000425836 IER5Q5VY09 327 aa27.26■■□□□ 1.95
VEGFA-209ENST00000425836 PADI6Q6TGC4 694 aa27.26■■□□□ 1.95
VEGFA-209ENST00000425836 MAP7D2Q96T17 732 aa27.26■■□□□ 1.95
VEGFA-209ENST00000425836 AKT3Q9Y243 479 aa27.26■■□□□ 1.95
VEGFA-209ENST00000425836 CDY2AQ9Y6F7 541 aa27.26■■□□□ 1.95
VEGFA-209ENST00000425836 USO1O60763 962 aaKnown RBP27.25■■□□□ 1.95
VEGFA-209ENST00000425836 DNM2P50570 870 aa27.25■■□□□ 1.95
VEGFA-209ENST00000425836 FPGSQ05932 587 aa27.25■■□□□ 1.95
VEGFA-209ENST00000425836 TMEM143Q96AN5 459 aa27.25■■□□□ 1.95
VEGFA-209ENST00000425836 VWCEQ96DN2 955 aa27.25■■□□□ 1.95
VEGFA-209ENST00000425836 MTRQ99707 1265 aa27.25■■□□□ 1.95
VEGFA-209ENST00000425836 GDF15Q99988 308 aa27.25■■□□□ 1.95
VEGFA-209ENST00000425836 ATP6V0A4Q9HBG4 840 aa27.25■■□□□ 1.95
VEGFA-209ENST00000425836 SUCLA2Q9P2R7 463 aaPredicted RBP27.25■■□□□ 1.95
VEGFA-209ENST00000425836 CCDC39Q9UFE4 941 aa27.25■■□□□ 1.95
VEGFA-209ENST00000425836 RBAK-RBAKDNI3L0D1 243 aa27.24■■□□□ 1.95
VEGFA-209ENST00000425836 GAS2O43903 313 aaKnown RBP27.24■■□□□ 1.95
VEGFA-209ENST00000425836 BLOC1S4Q9NUP1 217 aa27.24■■□□□ 1.95
VEGFA-209ENST00000425836 KAT6AQ92794 2004 aa27.24■■□□□ 1.95
VEGFA-209ENST00000425836 NBNO60934 754 aa27.23■■□□□ 1.95
VEGFA-209ENST00000425836 PARNO95453 639 aaKnown RBP27.23■■□□□ 1.95
VEGFA-209ENST00000425836 RFC2P35250 354 aa27.23■■□□□ 1.95
VEGFA-209ENST00000425836 EPHB4P54760 987 aa27.23■■□□□ 1.95
VEGFA-209ENST00000425836 PPIGQ13427 754 aaKnown RBP eCLIP27.23■■□□□ 1.951e-7■■□□□ 12.5
VEGFA-209ENST00000425836 PANK2Q9BZ23 570 aa27.23■■□□□ 1.95
VEGFA-209ENST00000425836 CELF4Q9BZC1 486 aaKnown RBP27.23■■□□□ 1.95
VEGFA-209ENST00000425836 OSBPL7Q9BZF2 842 aa27.23■■□□□ 1.95
VEGFA-209ENST00000425836 TRPV2Q9Y5S1 764 aa27.23■■□□□ 1.95
VEGFA-209ENST00000425836 A0A087X0B3 334 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 M0QZ92 97 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 GPR32O75388 356 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 PLA2G4BP0C869 781 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 CYP11B2P19099 503 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 ADALQ6DHV7 355 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 SYT2Q8N9I0 419 aaPredicted RBP27.22■■□□□ 1.95
VEGFA-209ENST00000425836 PPP1R16BQ96T49 567 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 CDHR5Q9HBB8 845 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 SLC12A3P55017 1021 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 KIZQ2M2Z5 673 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 RRAGBQ5VZM2 374 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 RESP18Q5W5W9 173 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 C16orf59Q7L2K0 433 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 MAEAQ7L5Y9 396 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 DEFB128Q7Z7B8 93 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 TCP11Q8WWU5 503 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 ADAMTS10Q9H324 1103 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 IL23AQ9NPF7 189 aa27.22■■□□□ 1.95
VEGFA-209ENST00000425836 ACRP10323 421 aa27.21■■□□□ 1.95
VEGFA-209ENST00000425836 GPC3P51654 580 aa27.21■■□□□ 1.95
VEGFA-209ENST00000425836 NLRP11P59045 1033 aaKnown RBP27.21■■□□□ 1.95
VEGFA-209ENST00000425836 RINT1Q6NUQ1 792 aa27.21■■□□□ 1.95
VEGFA-209ENST00000425836 RPUSD2Q8IZ73 545 aaKnown RBP27.21■■□□□ 1.95
VEGFA-209ENST00000425836 MCPH1Q8NEM0 835 aa27.21■■□□□ 1.95
VEGFA-209ENST00000425836 PRPF31Q8WWY3 499 aaKnown RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms