RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 TRPC6Q9Y210 931 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 TNRC18O15417 2968 aaPredicted RBP17.37■□□□□ 0.37
SHOX2-202ENST00000425436 POTEB3A0JP26 581 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 TMEM150BA6NC51 233 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 CBFA2T2O43439 604 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 P4HBP07237 508 aaKnown RBP17.37■□□□□ 0.37
SHOX2-202ENST00000425436 QARSP47897 775 aaKnown RBP17.37■□□□□ 0.37
SHOX2-202ENST00000425436 PSMC5P62195 406 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 IGBP1P78318 339 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 TLE2Q04725 743 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 DPYDQ12882 1025 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 PDIA5Q14554 519 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 SNX17Q15036 470 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 GDF6Q6KF10 455 aaPredicted RBP17.37■□□□□ 0.37
SHOX2-202ENST00000425436 POTEBQ6S5H4 581 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 ENOX1Q8TC92 643 aaKnown RBP17.37■□□□□ 0.37
SHOX2-202ENST00000425436 DPF3Q92784 378 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 HSD17B14Q9BPX1 270 aa17.37■□□□□ 0.37
SHOX2-202ENST00000425436 IGSF9BQ9UPX0 1349 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 A0A087X0B3 334 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 ZBTB39O15060 712 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 MED24O75448 989 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 INSRRP14616 1297 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 STAT6P42226 847 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 PRKCEQ02156 737 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 NCAPHQ15003 741 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 C1orf53Q5VUE5 145 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 RASSF8Q8NHQ8 419 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 TRAPPC12Q8WVT3 735 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 ATP6V0A1Q93050 837 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 ZBTB10Q96DT7 871 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 SH2D3AQ9BRG2 576 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 LXNQ9BS40 222 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 PCDH10Q9P2E7 1040 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 IMPACTQ9P2X3 320 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 GTF2IRD1Q9UHL9 959 aa17.36■□□□□ 0.37
SHOX2-202ENST00000425436 SLC26A4O43511 780 aa17.35■□□□□ 0.37
SHOX2-202ENST00000425436 B4GALT4O60513 344 aa17.35■□□□□ 0.37
SHOX2-202ENST00000425436 STBD1O95210 358 aa17.35■□□□□ 0.37
SHOX2-202ENST00000425436 SPATA31C1P0DKV0 1188 aa17.35■□□□□ 0.37
SHOX2-202ENST00000425436 AFMP43652 599 aa17.35■□□□□ 0.37
SHOX2-202ENST00000425436 RGS19P49795 217 aa17.35■□□□□ 0.37
SHOX2-202ENST00000425436 SLC26A2P50443 739 aa17.35■□□□□ 0.37
SHOX2-202ENST00000425436 PPFIA1Q13136 1202 aa17.35■□□□□ 0.37
SHOX2-202ENST00000425436 CATSPER3Q86XQ3 398 aa17.35■□□□□ 0.37
SHOX2-202ENST00000425436 FAM126BQ8IXS8 530 aa17.35■□□□□ 0.37
SHOX2-202ENST00000425436 ATP8B4Q8TF62 1192 aa17.35■□□□□ 0.37
SHOX2-202ENST00000425436 HTATIP2Q9BUP3 242 aa17.35■□□□□ 0.37
SHOX2-202ENST00000425436 C17orf102A2RUQ5 167 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 OATP04181 439 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 PRR29P0C7W0 189 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 CCT6AP40227 531 aaKnown RBP17.34■□□□□ 0.37
SHOX2-202ENST00000425436 AMPD3Q01432 767 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 FAAP100Q0VG06 881 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 GRIK4Q16099 956 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 ECM1Q16610 540 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 PTGISQ16647 500 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 ISM2Q6H9L7 571 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 ANKRD33Q7Z3H0 272 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 SESTD1Q86VW0 696 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 ERMNQ8TAM6 284 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 LMBR1Q8WVP7 490 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
SHOX2-202ENST00000425436 MMTAG2Q9BU76 263 aaKnown RBP17.34■□□□□ 0.37
SHOX2-202ENST00000425436 ZSWIM4Q9H7M6 989 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 NRBP2Q9NSY0 501 aa17.34■□□□□ 0.37
SHOX2-202ENST00000425436 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.34■□□□□ 0.37
SHOX2-202ENST00000425436 DCDC2CA8MYV0 355 aa17.33■□□□□ 0.37
SHOX2-202ENST00000425436 TREHO43280 583 aa17.33■□□□□ 0.37
SHOX2-202ENST00000425436 HBP1O60381 514 aa17.33■□□□□ 0.37
SHOX2-202ENST00000425436 CYP2C9P11712 490 aa17.33■□□□□ 0.37
SHOX2-202ENST00000425436 PTPN11Q06124 597 aaPredicted RBP17.33■□□□□ 0.37
SHOX2-202ENST00000425436 PLA2G4FQ68DD2 849 aa17.33■□□□□ 0.37
SHOX2-202ENST00000425436 ANO5Q75V66 913 aa17.33■□□□□ 0.37
SHOX2-202ENST00000425436 CABP7Q86V35 215 aa17.33■□□□□ 0.37
SHOX2-202ENST00000425436 C7orf61Q8IZ16 206 aa17.33■□□□□ 0.37
SHOX2-202ENST00000425436 SPC24Q8NBT2 197 aa17.33■□□□□ 0.37
SHOX2-202ENST00000425436 SNX29Q8TEQ0 813 aa17.33■□□□□ 0.37
SHOX2-202ENST00000425436 CCDC47Q96A33 483 aaKnown RBP17.33■□□□□ 0.37
SHOX2-202ENST00000425436 CALML4Q96GE6 196 aa17.33■□□□□ 0.37
SHOX2-202ENST00000425436 PLIN2Q99541 437 aa17.33■□□□□ 0.37
SHOX2-202ENST00000425436 POLR3CQ9BUI4 534 aaPredicted RBP17.33■□□□□ 0.37
SHOX2-202ENST00000425436 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.33■□□□□ 0.37
SHOX2-202ENST00000425436 SEPT9Q9UHD8 586 aaPredicted RBP17.33■□□□□ 0.37
SHOX2-202ENST00000425436 NRCAMQ92823 1304 aa17.33■□□□□ 0.36
SHOX2-202ENST00000425436 ZBTB42B2RXF5 422 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 EVI5O60447 810 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 CD4P01730 458 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 BMP6P22004 513 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 RPA1P27694 616 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 GSDMDP57764 484 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 XKR3Q5GH77 459 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 MARCH8Q5T0T0 291 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 KRT79Q5XKE5 535 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 POTEGQ6S5H5 508 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 C4orf19Q8IY42 314 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 GRAMD1CQ8IYS0 662 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 PIGOQ8TEQ8 1089 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 TOX2Q96NM4 488 aa17.32■□□□□ 0.36
SHOX2-202ENST00000425436 CTAGE1Q96RT6 745 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms