RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 HOXD8P13378 290 aaPredicted RBP14.92□□□□□ -0.02
PRPF39-202ENST00000424478 MAPK7Q13164 816 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 EMC2Q15006 297 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 KLHL10Q6JEL2 608 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 OTUD6AQ7L8S5 288 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 LMBR1Q8WVP7 490 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 ZNF333Q96JL9 665 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 C7orf25Q9BPX7 421 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 FAM49AQ9H0Q0 323 aaPredicted RBP14.92□□□□□ -0.02
PRPF39-202ENST00000424478 NRBP2Q9NSY0 501 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 ZNF215Q9UL58 517 aaPredicted RBP14.92□□□□□ -0.02
PRPF39-202ENST00000424478 GRIN2DO15399 1336 aa14.92□□□□□ -0.02
PRPF39-202ENST00000424478 TYRO3Q06418 890 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 TBC1D8BQ0IIM8 1120 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 MKRN4PQ13434 485 aaPredicted RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 GRIK4Q16099 956 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 HERC4Q5GLZ8 1057 aaPredicted RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 CCSAPQ6IQ19 270 aaPredicted RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 KLHDC9Q8NEP7 349 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 DIS3LQ8TF46 1054 aaKnown RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 BBXQ8WY36 941 aaPredicted RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 MCOLN1Q9GZU1 580 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 UPF3AQ9H1J1 476 aaKnown RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 CUEDC2Q9H467 287 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 PAK6Q9NQU5 681 aaPredicted RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 DBR1Q9UK59 544 aaKnown RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 CD44P16070 742 aaKnown RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 KLRC1P26715 233 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 NMT1P30419 496 aaKnown RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 ACLYP53396 1101 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 COASYQ13057 564 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 TARBP2Q15633 366 aaKnown RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 BRDTQ58F21 947 aaPredicted RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 MARCH8Q5T0T0 291 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 ANKEF1Q9NU02 776 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 USP25Q9UHP3 1055 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 GINS2Q9Y248 185 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 STK24Q9Y6E0 443 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 TREHO43280 583 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 ATN1P54259 1190 aaPredicted RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 KCNA1Q09470 495 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 ZC2HC1CQ53FD0 456 aaPredicted RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 KANK3Q6NY19 840 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 RBM43Q6ZSC3 357 aaKnown RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 RNF180Q86T96 592 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 MYCT1Q8N699 235 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 PYM1Q9BRP8 204 aaKnown RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 Q9Y3F1 56 aa14.91□□□□□ -0.02
PRPF39-202ENST00000424478 RANBP2P49792 3224 aaKnown RBP14.91□□□□□ -0.02
PRPF39-202ENST00000424478 VTNP04004 478 aa14.9□□□□□ -0.02
PRPF39-202ENST00000424478 SARSP49591 514 aaKnown RBP14.9□□□□□ -0.02
PRPF39-202ENST00000424478 SASS6Q6UVJ0 657 aa14.9□□□□□ -0.02
PRPF39-202ENST00000424478 RUFY4Q6ZNE9 571 aa14.9□□□□□ -0.02
PRPF39-202ENST00000424478 NIFKQ9BYG3 293 aaKnown RBP14.9□□□□□ -0.02
PRPF39-202ENST00000424478 PEX3P56589 373 aa14.9□□□□□ -0.02
PRPF39-202ENST00000424478 STX17P56962 302 aa14.9□□□□□ -0.02
PRPF39-202ENST00000424478 AMPD3Q01432 767 aa14.9□□□□□ -0.02
PRPF39-202ENST00000424478 ANO6Q4KMQ2 910 aa14.9□□□□□ -0.02
PRPF39-202ENST00000424478 HSP90AA4PQ58FG1 418 aa14.9□□□□□ -0.02
PRPF39-202ENST00000424478 KIAA0895Q8NCT3 520 aa14.9□□□□□ -0.02
PRPF39-202ENST00000424478 ASAP3Q8TDY4 903 aa14.9□□□□□ -0.02
PRPF39-202ENST00000424478 POLR3FQ9H1D9 316 aaPredicted RBP14.9□□□□□ -0.02
PRPF39-202ENST00000424478 EXOC1Q9NV70 894 aa14.9□□□□□ -0.02
PRPF39-202ENST00000424478 TUBE1Q9UJT0 475 aa14.9□□□□□ -0.02
PRPF39-202ENST00000424478 HBP1O60381 514 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 TBCAO75347 108 aaKnown RBP14.89□□□□□ -0.03
PRPF39-202ENST00000424478 FAM13AO94988 1023 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 MYBP10242 640 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 EFCAB12Q6NXP0 572 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 NELFCDQ8IXH7 590 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 C7orf31Q8N865 590 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 U2AF1L4Q8WU68 220 aaKnown RBP14.89□□□□□ -0.03
PRPF39-202ENST00000424478 SLC7A3Q8WY07 619 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 HOOK1Q9UJC3 728 aaKnown RBP14.89□□□□□ -0.03
PRPF39-202ENST00000424478 C22orf31O95567 290 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 TFRCP02786 760 aaKnown RBP14.89□□□□□ -0.03
PRPF39-202ENST00000424478 ODR4Q5SWX8 454 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 GDF6Q6KF10 455 aaPredicted RBP14.89□□□□□ -0.03
PRPF39-202ENST00000424478 SPATA20Q8TB22 786 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 WNT8BQ93098 351 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 MTG1Q9BT17 334 aaPredicted RBP14.89□□□□□ -0.03
PRPF39-202ENST00000424478 FUCA2Q9BTY2 467 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 DHX33Q9H6R0 707 aaKnown RBP14.89□□□□□ -0.03
PRPF39-202ENST00000424478 ATP6V0A4Q9HBG4 840 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 TRMT13Q9NUP7 481 aaKnown RBP14.89□□□□□ -0.03
PRPF39-202ENST00000424478 SCN10AQ9Y5Y9 1956 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 DKC1O60832 514 aaKnown RBP eCLIP14.89□□□□□ -0.039e-9■■■■□ 19.9
PRPF39-202ENST00000424478 SMC2O95347 1197 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 SRGAP2CP0DJJ0 459 aa14.89□□□□□ -0.03
PRPF39-202ENST00000424478 ADGRA3Q8IWK6 1321 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 A0A1W2PQ45 241 aaPredicted RBP14.88□□□□□ -0.03
PRPF39-202ENST00000424478 A0A1W2PQY0 241 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 CCDC169A6NNP5 214 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 SLC16A4O15374 487 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 MUTP22033 750 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 UNC13DQ70J99 1090 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 RHPN2Q8IUC4 686 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 PRPF31Q8WWY3 499 aaKnown RBP14.88□□□□□ -0.03
PRPF39-202ENST00000424478 NLRP4Q96MN2 994 aa14.88□□□□□ -0.03
PRPF39-202ENST00000424478 HAS3O00219 553 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms