RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 GOLGA6L6A8MZA4 724 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 SLC26A4O43511 780 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 SOD2P04179 222 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 ITGB1P05556 798 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 FAM153BP0C7A2 387 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 MC4RP32245 332 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 AVPR1BP47901 424 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 RASA3Q14644 834 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 NOLC1Q14978 699 aaKnown RBP eCLIP2.1□□□□□ -2.07
PMS1-210ENST00000424307 EIF4HQ15056 248 aaKnown RBP2.1□□□□□ -2.07
PMS1-210ENST00000424307 HABP4Q5JVS0 413 aaKnown RBP2.1□□□□□ -2.07
PMS1-210ENST00000424307 STYK1Q6J9G0 422 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 NSMFQ6X4W1 530 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 HTR3DQ70Z44 454 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 SLC25A43Q8WUT9 341 aaPredicted RBP2.1□□□□□ -2.07
PMS1-210ENST00000424307 TACO1Q9BSH4 297 aaKnown RBP2.1□□□□□ -2.07
PMS1-210ENST00000424307 AARSD1Q9BTE6 412 aaKnown RBP2.1□□□□□ -2.07
PMS1-210ENST00000424307 CCDC9Q9Y3X0 531 aaKnown RBP2.1□□□□□ -2.07
PMS1-210ENST00000424307 RASSF10A6NK89 507 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 MATN2O00339 956 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 RASGRP1O95267 797 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 PYGMP11217 842 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 FGFR1P11362 822 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 PDE6AP16499 860 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 MEOX1P50221 254 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 JAM2P57087 298 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 PFKPQ01813 784 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 TBR1Q16650 682 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 PRR16Q569H4 304 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 HECTD2Q5U5R9 776 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 TRIM68Q6AZZ1 485 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 OSTM1Q86WC4 334 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 VPS37DQ86XT2 251 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 GSPT2Q8IYD1 628 aaKnown RBP2.1□□□□□ -2.07
PMS1-210ENST00000424307 C9orf106Q8NAJ2 232 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 UHMK1Q8TAS1 419 aaKnown RBP2.1□□□□□ -2.07
PMS1-210ENST00000424307 CFHR4Q92496 578 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 SCLYQ96I15 445 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 COQ10AQ96MF6 247 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 SMURF1Q9HCE7 757 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 PODXL2Q9NZ53 605 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 COQ6Q9Y2Z9 468 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 VWA7Q9Y334 891 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 PCDHA9Q9Y5H5 950 aa2.1□□□□□ -2.07
PMS1-210ENST00000424307 GRID2IPA4D2P6 1211 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 MAN2B1O00754 1011 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 SRGAP2CP0DJJ0 459 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 ZNF37AP17032 561 aaPredicted RBP2.09□□□□□ -2.07
PMS1-210ENST00000424307 NHLH1Q02575 133 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 FSTL1Q12841 308 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 SERINC3Q13530 473 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 TOB2Q14106 344 aaPredicted RBP2.09□□□□□ -2.07
PMS1-210ENST00000424307 STILQ15468 1287 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 KIAA1614Q5VZ46 1190 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 MBNL2Q5VZF2 373 aaKnown RBP2.09□□□□□ -2.07
PMS1-210ENST00000424307 MFSD5Q6N075 450 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 RD3Q7Z3Z2 195 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 FGD2Q7Z6J4 655 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 PTRH1Q86Y79 214 aaKnown RBP2.09□□□□□ -2.07
PMS1-210ENST00000424307 SLC43A3Q8NBI5 491 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 SHCBP1Q8NEM2 672 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 PCDH19Q8TAB3 1148 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 DPYSL5Q9BPU6 564 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 SLC52A2Q9HAB3 445 aa2.09□□□□□ -2.07
PMS1-210ENST00000424307 ERVV-2B6SEH9 535 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 TRIM24O15164 1050 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 PDPK1O15530 556 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 CRTAMO95727 393 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 ABHD16AO95870 558 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 GNAT1P11488 350 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 GNL2Q13823 731 aaKnown RBP2.09□□□□□ -2.08
PMS1-210ENST00000424307 HSP90AA2PQ14568 343 aaPredicted RBP2.09□□□□□ -2.08
PMS1-210ENST00000424307 ACAP1Q15027 740 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 WDR72Q3MJ13 1102 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 ATG9BQ674R7 924 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 NAIF1Q69YI7 327 aaPredicted RBP2.09□□□□□ -2.08
PMS1-210ENST00000424307 LRSAM1Q6UWE0 723 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 KCTD1Q719H9 257 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.09□□□□□ -2.08
PMS1-210ENST00000424307 NLGN4XQ8N0W4 816 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 CISD2Q8N5K1 135 aaKnown RBP2.09□□□□□ -2.08
PMS1-210ENST00000424307 ST13P5Q8NFI4 369 aaPredicted RBP2.09□□□□□ -2.08
PMS1-210ENST00000424307 WDR48Q8TAF3 677 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 SLC7A14Q8TBB6 771 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 ZFYVE21Q9BQ24 234 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 SPATA9Q9BWV2 254 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 KMT5AQ9NQR1 393 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 DSEQ9UL01 958 aa2.09□□□□□ -2.08
PMS1-210ENST00000424307 TRAV20A0A0B4J274 112 aa2.08□□□□□ -2.08
PMS1-210ENST00000424307 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.08□□□□□ -2.08
PMS1-210ENST00000424307 PTPN1P18031 435 aaKnown RBP2.08□□□□□ -2.08
PMS1-210ENST00000424307 KRT15P19012 456 aa2.08□□□□□ -2.08
PMS1-210ENST00000424307 GJA4P35212 333 aa2.08□□□□□ -2.08
PMS1-210ENST00000424307 GTF2F1P35269 517 aaKnown RBP eCLIP2.08□□□□□ -2.08
PMS1-210ENST00000424307 ADCY8P40145 1251 aa2.08□□□□□ -2.08
PMS1-210ENST00000424307 STAT3P40763 770 aa2.08□□□□□ -2.08
PMS1-210ENST00000424307 USP14P54578 494 aa2.08□□□□□ -2.08
PMS1-210ENST00000424307 RRADP55042 308 aa2.08□□□□□ -2.08
PMS1-210ENST00000424307 GPR85P60893 370 aa2.08□□□□□ -2.08
PMS1-210ENST00000424307 SSRP1Q08945 709 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms