RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 COL1A2P08123 1366 aa19.09■□□□□ 0.65
CHCHD3-202ENST00000423635 PPM1AP35813 382 aa19.09■□□□□ 0.65
CHCHD3-202ENST00000423635 ZNF484Q5JVG2 852 aa19.09■□□□□ 0.65
CHCHD3-202ENST00000423635 ASTLQ6HA08 431 aaPredicted RBP19.09■□□□□ 0.65
CHCHD3-202ENST00000423635 ABHD15Q6UXT9 468 aa19.09■□□□□ 0.65
CHCHD3-202ENST00000423635 TMC7Q7Z402 723 aa19.09■□□□□ 0.65
CHCHD3-202ENST00000423635 FAM228AQ86W67 206 aa19.09■□□□□ 0.65
CHCHD3-202ENST00000423635 TEX2Q8IWB9 1127 aa19.09■□□□□ 0.65
CHCHD3-202ENST00000423635 CMTR1Q8N1G2 835 aaKnown RBP19.09■□□□□ 0.65
CHCHD3-202ENST00000423635 AGO4Q9HCK5 861 aaKnown RBP19.09■□□□□ 0.65
CHCHD3-202ENST00000423635 TSHZ2Q9NRE2 1034 aa19.09■□□□□ 0.65
CHCHD3-202ENST00000423635 HCFC2Q9Y5Z7 792 aa19.09■□□□□ 0.65
CHCHD3-202ENST00000423635 ZBTB42B2RXF5 422 aa19.08■□□□□ 0.65
CHCHD3-202ENST00000423635 MEIS1O00470 390 aa19.08■□□□□ 0.65
CHCHD3-202ENST00000423635 HOXA2O43364 376 aa19.08■□□□□ 0.65
CHCHD3-202ENST00000423635 CLCN5P51795 746 aa19.08■□□□□ 0.65
CHCHD3-202ENST00000423635 CEP55Q53EZ4 464 aa19.08■□□□□ 0.65
CHCHD3-202ENST00000423635 ZDHHC14Q8IZN3 488 aa19.08■□□□□ 0.65
CHCHD3-202ENST00000423635 ZNF558Q96NG5 402 aa19.08■□□□□ 0.65
CHCHD3-202ENST00000423635 RNF19AQ9NV58 838 aa19.08■□□□□ 0.65
CHCHD3-202ENST00000423635 CDH22Q9UJ99 828 aa19.08■□□□□ 0.65
CHCHD3-202ENST00000423635 C2orf71A6NGG8 1288 aa19.07■□□□□ 0.64
CHCHD3-202ENST00000423635 GPR32O75388 356 aa19.07■□□□□ 0.64
CHCHD3-202ENST00000423635 CALM1P0DP23 149 aa19.07■□□□□ 0.64
CHCHD3-202ENST00000423635 CALM2P0DP24 149 aa19.07■□□□□ 0.64
CHCHD3-202ENST00000423635 CALM3P0DP25 149 aa19.07■□□□□ 0.64
CHCHD3-202ENST00000423635 MTHFRP42898 656 aa19.07■□□□□ 0.64
CHCHD3-202ENST00000423635 FAM160B1Q5W0V3 765 aa19.07■□□□□ 0.64
CHCHD3-202ENST00000423635 MAP4K1Q92918 833 aa19.07■□□□□ 0.64
CHCHD3-202ENST00000423635 OSMRQ99650 979 aa19.07■□□□□ 0.64
CHCHD3-202ENST00000423635 SPG21Q9NZD8 308 aa19.07■□□□□ 0.64
CHCHD3-202ENST00000423635 hCG_1642624A0A1W2PR95 340 aa19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 CLASP2O75122 1294 aaKnown RBP19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 CCNE2O96020 404 aa19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 GSPT1P15170 499 aaKnown RBP19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 ATP4AP20648 1035 aa19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 CHMLP26374 656 aa19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 SMC1AQ14683 1233 aaKnown RBP19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 KIZQ2M2Z5 673 aa19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 MCTP2Q6DN12 878 aa19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 CASC1Q6TDU7 716 aa19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 LRRC43Q8N309 656 aa19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 PLCD3Q8N3E9 789 aa19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 NKD2Q969F2 451 aaPredicted RBP19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 SMOC2Q9H3U7 446 aa19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 USTQ9Y2C2 406 aa19.06■□□□□ 0.64
CHCHD3-202ENST00000423635 EVPLQ92817 2033 aa19.05■□□□□ 0.64
CHCHD3-202ENST00000423635 CCDC69A6NI79 296 aa19.05■□□□□ 0.64
CHCHD3-202ENST00000423635 SH2B2O14492 632 aaPredicted RBP19.05■□□□□ 0.64
CHCHD3-202ENST00000423635 BACH1O14867 736 aa19.05■□□□□ 0.64
CHCHD3-202ENST00000423635 C22orf31O95567 290 aa19.05■□□□□ 0.64
CHCHD3-202ENST00000423635 FOSP01100 380 aaPredicted RBP19.05■□□□□ 0.64
CHCHD3-202ENST00000423635 LIFRP42702 1097 aa19.05■□□□□ 0.64
CHCHD3-202ENST00000423635 CCDC60Q8IWA6 550 aaPredicted RBP19.05■□□□□ 0.64
CHCHD3-202ENST00000423635 SLC39A11Q8N1S5 342 aa19.05■□□□□ 0.64
CHCHD3-202ENST00000423635 TMEM87BQ96K49 555 aa19.05■□□□□ 0.64
CHCHD3-202ENST00000423635 ZNF302Q9NR11 478 aa19.05■□□□□ 0.64
CHCHD3-202ENST00000423635 DHX15O43143 795 aaKnown RBP19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 PRC1O43663 620 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 RXRAP19793 462 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 PBX3P40426 434 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 TTC22Q5TAA0 569 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 PDXDC2PQ6P474 469 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 NFXL1Q6ZNB6 911 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 NIPA1Q7RTP0 329 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 FRMD5Q7Z6J6 570 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 ECHDC2Q86YB7 292 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 ABI1Q8IZP0 508 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 CCDC82Q8N4S0 544 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 FANCBQ8NB91 859 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 BBXQ8WY36 941 aaPredicted RBP19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 RIC8AQ9NPQ8 531 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 LIMD1Q9UGP4 676 aa19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 MAFBQ9Y5Q3 323 aaPredicted RBP19.04■□□□□ 0.64
CHCHD3-202ENST00000423635 SGSM2O43147 1006 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 VTNP04004 478 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 ASGR2P07307 311 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 ZSCAN20P17040 1043 aaPredicted RBP19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 MCM5P33992 734 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 ID4P47928 161 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 ATAT1Q5SQI0 421 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 KIAA1841Q6NSI8 718 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 SWSAP1Q6NVH7 229 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 TMTC3Q6ZXV5 915 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 HEATR3Q7Z4Q2 680 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 ADSSL1Q8N142 457 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 ZNF710Q8N1W2 664 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 TDRD5Q8NAT2 981 aaKnown RBP19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 PPP1R16BQ96T49 567 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 MFSD1Q9H3U5 465 aa19.03■□□□□ 0.64
CHCHD3-202ENST00000423635 CXCL14O95715 111 aa19.02■□□□□ 0.64
CHCHD3-202ENST00000423635 EOMESO95936 686 aa19.02■□□□□ 0.64
CHCHD3-202ENST00000423635 SREBF1P36956 1147 aa19.02■□□□□ 0.64
CHCHD3-202ENST00000423635 CLLU1OSQ5K130 101 aa19.02■□□□□ 0.64
CHCHD3-202ENST00000423635 WWC2Q6AWC2 1192 aa19.02■□□□□ 0.64
CHCHD3-202ENST00000423635 TYW1BQ6NUM6 668 aa19.02■□□□□ 0.64
CHCHD3-202ENST00000423635 MIS18BP1Q6P0N0 1132 aa19.02■□□□□ 0.64
CHCHD3-202ENST00000423635 PGBD1Q96JS3 809 aa19.02■□□□□ 0.64
CHCHD3-202ENST00000423635 ANO3Q9BYT9 981 aa19.02■□□□□ 0.64
CHCHD3-202ENST00000423635 ADAMTS10Q9H324 1103 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms