RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 FAM20AQ96MK3 541 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDH1-202ENST00000422392 ZNF219Q9P2Y4 722 aaPredicted RBP17.22■□□□□ 0.35
CDH1-202ENST00000422392 NENFQ9UMX5 172 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 NR2E1Q9Y466 385 aa17.22■□□□□ 0.35
CDH1-202ENST00000422392 IGSF9BQ9UPX0 1349 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 DAPK3O43293 454 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 TRIM49P0CI25 452 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 TRIM49CP0CI26 452 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 RRP1BQ14684 758 aaKnown RBP17.21■□□□□ 0.35
CDH1-202ENST00000422392 BMT2Q1RMZ1 405 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 ABCB5Q2M3G0 1257 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
CDH1-202ENST00000422392 DYDC2Q96IM9 177 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 ZDHHC15Q96MV8 337 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 WDR18Q9BV38 432 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 FAM107BQ9H098 131 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 A0A1W2PRG0 241 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 TTI1O43156 1089 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 FAM13AO94988 1023 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 EYA4O95677 639 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 GH2P01242 217 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 COPB2P35606 906 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 IFI16Q16666 785 aaKnown RBP17.21■□□□□ 0.35
CDH1-202ENST00000422392 CBWD6Q4V339 395 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 CBWD3Q5JTY5 395 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 CBWD5Q5RIA9 395 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 NT5DC3Q86UY8 548 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 CD302Q8IX05 232 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 FAM186BQ8IYM0 893 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 OLIG1Q8TAK6 271 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 BORCS6Q96GS4 357 aa17.21■□□□□ 0.35
CDH1-202ENST00000422392 METTL14Q9HCE5 456 aaKnown RBP17.21■□□□□ 0.35
CDH1-202ENST00000422392 A0A087WUV0 522 aaPredicted RBP17.2■□□□□ 0.34
CDH1-202ENST00000422392 CFBP00751 764 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 CYP2J2P51589 502 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 ITGB3BPQ13352 177 aaPredicted RBP17.2■□□□□ 0.34
CDH1-202ENST00000422392 PALB2Q86YC2 1186 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 RDH13Q8NBN7 331 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 KAT2BQ92831 832 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 TRIM31Q9BZY9 425 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 DPH5Q9H2P9 285 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 LRRC4CQ9HCJ2 640 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 STXBP5LQ9Y2K9 1186 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 IGLV3-22A0A075B6J6 115 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 CES2O00748 559 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 SLC26A4O43511 780 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 SLITRK3O94933 977 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 TATDN1Q6P1N9 297 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 VPS36Q86VN1 386 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 UBLCP1Q8WVY7 318 aaPredicted RBP17.2■□□□□ 0.34
CDH1-202ENST00000422392 BCCIPQ9P287 314 aaKnown RBP eCLIP17.2■□□□□ 0.34
CDH1-202ENST00000422392 FBXL5Q9UKA1 691 aa17.2■□□□□ 0.34
CDH1-202ENST00000422392 SLC16A3O15427 465 aaKnown RBP17.19■□□□□ 0.34
CDH1-202ENST00000422392 BUB1BO60566 1050 aaPredicted RBP17.19■□□□□ 0.34
CDH1-202ENST00000422392 BMP3P12645 472 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 CTNNA1P35221 906 aaKnown RBP17.19■□□□□ 0.34
CDH1-202ENST00000422392 STAT1P42224 750 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 ECE1P42892 770 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 PLS1Q14651 629 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 DRAP1Q14919 205 aaPredicted RBP17.19■□□□□ 0.34
CDH1-202ENST00000422392 TMEM179Q6ZVK1 233 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 SLFN11Q7Z7L1 901 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 SLC35G2Q8TBE7 412 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 TMBIM4Q9HC24 238 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 SEPT11Q9NVA2 429 aaKnown RBP17.19■□□□□ 0.34
CDH1-202ENST00000422392 TAS2R14Q9NYV8 317 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 WRAP73Q9P2S5 460 aaPredicted RBP17.19■□□□□ 0.34
CDH1-202ENST00000422392 PPP1R9AQ9ULJ8 1098 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 UBAP1LF5GYI3 381 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 F8VZ95 297 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 H0YGN5 161 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 ERLIN2O94905 339 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 FOSP01100 380 aaPredicted RBP17.19■□□□□ 0.34
CDH1-202ENST00000422392 CIITAP33076 1130 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 PRPF4BQ13523 1007 aaKnown RBP17.19■□□□□ 0.34
CDH1-202ENST00000422392 ARHGAP44Q17R89 818 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 HSD17B14Q9BPX1 270 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 TRIM51Q9BSJ1 452 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 POLR3CQ9BUI4 534 aaPredicted RBP17.19■□□□□ 0.34
CDH1-202ENST00000422392 TDRD3Q9H7E2 651 aaKnown RBP17.19■□□□□ 0.34
CDH1-202ENST00000422392 OLFML3Q9NRN5 406 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 DNAJC12Q9UKB3 198 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 NFS1Q9Y697 457 aa17.19■□□□□ 0.34
CDH1-202ENST00000422392 PPP1R37O75864 691 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 FGGP02679 453 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 FMO5P49326 533 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 DCAF12L1Q5VU92 463 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 LRCH2Q5VUJ6 765 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 OTOP1Q7RTM1 612 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 BANK1Q8NDB2 785 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 EPN3Q9H201 632 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 PPANQ9NQ55 473 aaKnown RBP17.18■□□□□ 0.34
CDH1-202ENST00000422392 PRR12Q9ULL5 1215 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 LRRN2O75325 713 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 TRIM37O94972 964 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 SOX5P35711 763 aa17.18■□□□□ 0.34
CDH1-202ENST00000422392 PSMC2P35998 433 aaKnown RBP17.18■□□□□ 0.34
CDH1-202ENST00000422392 MDH1P40925 334 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms