RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ARVCFO00192 962 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 TREHO43280 583 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 CYP11B2P19099 503 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 KLRC1P26715 233 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 ADAM17P78536 824 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
DDX55-203ENST00000421670 ARSHQ5FYA8 562 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 RINT1Q6NUQ1 792 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 MTHFD1LQ6UB35 978 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 MAEAQ7L5Y9 396 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 NECAB2Q7Z6G3 386 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 LRRC71Q8N4P6 559 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 SLC43A3Q8NBI5 491 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 SLC7A3Q8WY07 619 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 DHX33Q9H6R0 707 aaKnown RBP17.47■□□□□ 0.39
DDX55-203ENST00000421670 MAGEF1Q9HAY2 307 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 POLD4Q9HCU8 107 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 TRMT13Q9NUP7 481 aaKnown RBP17.47■□□□□ 0.39
DDX55-203ENST00000421670 USP25Q9UHP3 1055 aa17.47■□□□□ 0.39
DDX55-203ENST00000421670 MYMKA6NI61 221 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 MAFO75444 373 aaPredicted RBP17.46■□□□□ 0.39
DDX55-203ENST00000421670 DGAT1O75907 488 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 CAPN2P17655 700 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 RFC5P40937 340 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 DRP2Q13474 957 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 SLC39A5Q6ZMH5 540 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 C1orf186Q6ZWK4 172 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 DYMQ7RTS9 669 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 METTL13Q8N6R0 699 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 PAGE5Q96GU1 130 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 SUGCTQ9HAC7 445 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 ATP6V0A4Q9HBG4 840 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 XPNPEP1Q9NQW7 623 aa17.46■□□□□ 0.39
DDX55-203ENST00000421670 MBLAC1A4D2B0 266 aaPredicted RBP17.45■□□□□ 0.38
DDX55-203ENST00000421670 B4GALT4O60513 344 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 MBD3O95983 291 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 PRR29P0C7W0 189 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 GNAT1P11488 350 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 CLCN3P51790 818 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 PTGISQ16647 500 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 RUFY4Q6ZNE9 571 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 UBE2Q1Q7Z7E8 422 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 CTAGE1Q96RT6 745 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 REEP2Q9BRK0 252 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 TRPV6Q9H1D0 765 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 BLZF1Q9H2G9 400 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 GPRC5CQ9NQ84 441 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 PPME1Q9Y570 386 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 TANC1Q9C0D5 1861 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 IGKV6-21A0A0C4DH24 114 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 PQBP1O60828 265 aaKnown RBP17.45■□□□□ 0.38
DDX55-203ENST00000421670 KRT18P05783 430 aaKnown RBP17.45■□□□□ 0.38
DDX55-203ENST00000421670 CDK7P50613 346 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 PTPN11Q06124 597 aaPredicted RBP17.45■□□□□ 0.38
DDX55-203ENST00000421670 CUL4BQ13620 913 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 EFCAB12Q6NXP0 572 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 DDX12PQ92771 950 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 TMEM143Q96AN5 459 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 TIGD1Q96MW7 591 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 TRIM9Q9C026 710 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 PDLIM7Q9NR12 457 aa17.45■□□□□ 0.38
DDX55-203ENST00000421670 RSPH10B2B2RC85 870 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 MAGEB2O15479 319 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 HIP1RO75146 1068 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 RSPH10BP0C881 870 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 CYP2C9P11712 490 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 PTMSP20962 102 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 MKRN4PQ13434 485 aaPredicted RBP17.44■□□□□ 0.38
DDX55-203ENST00000421670 PNOCQ13519 176 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 SNX17Q15036 470 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 CAMK4Q16566 473 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 TRIM60Q495X7 471 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 FAM102BQ5T8I3 360 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 SH3RF1Q7Z6J0 888 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 FAM126BQ8IXS8 530 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 LINC01465Q8N7H1 131 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 RETREG2Q8NC44 543 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 MCPH1Q8NEM0 835 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 ERCC4Q92889 916 aaPredicted RBP17.44■□□□□ 0.38
DDX55-203ENST00000421670 WNT8BQ93098 351 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 FAM49AQ9H0Q0 323 aaPredicted RBP17.44■□□□□ 0.38
DDX55-203ENST00000421670 KCND2Q9NZV8 630 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 NOD1Q9Y239 953 aa17.44■□□□□ 0.38
DDX55-203ENST00000421670 GUCY2CP25092 1073 aa17.43■□□□□ 0.38
DDX55-203ENST00000421670 AMPD3Q01432 767 aa17.43■□□□□ 0.38
DDX55-203ENST00000421670 GIT2Q14161 759 aa17.43■□□□□ 0.38
DDX55-203ENST00000421670 POSTNQ15063 836 aa17.43■□□□□ 0.38
DDX55-203ENST00000421670 DAW1Q8N136 415 aa17.43■□□□□ 0.38
DDX55-203ENST00000421670 DNAJC19Q96DA6 116 aa17.43■□□□□ 0.38
DDX55-203ENST00000421670 POLR3FQ9H1D9 316 aaPredicted RBP17.43■□□□□ 0.38
DDX55-203ENST00000421670 ATP11BQ9Y2G3 1177 aa17.43■□□□□ 0.38
DDX55-203ENST00000421670 PCDHA2Q9Y5H9 948 aa17.43■□□□□ 0.38
DDX55-203ENST00000421670 RTP1P59025 263 aa17.42■□□□□ 0.38
DDX55-203ENST00000421670 ASIC1P78348 528 aa17.42■□□□□ 0.38
DDX55-203ENST00000421670 MAPK7Q13164 816 aa17.42■□□□□ 0.38
DDX55-203ENST00000421670 KANK3Q6NY19 840 aa17.42■□□□□ 0.38
DDX55-203ENST00000421670 SERINC5Q86VE9 423 aa17.42■□□□□ 0.38
DDX55-203ENST00000421670 DNAJB3Q8WWF6 145 aa17.42■□□□□ 0.38
DDX55-203ENST00000421670 C7orf25Q9BPX7 421 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms